Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HIPK4Q8NE63 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 RNF165-205ENST00000588679 2904 ntBASIC20.86■□□□□ 0.93
HIPK4Q8NE63 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK4Q8NE63 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 AC012354.3-201ENST00000623734 483 ntBASIC20.85■□□□□ 0.93
HIPK4Q8NE63 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK4Q8NE63 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 SNX5-217ENST00000606557 1087 ntBASIC20.84■□□□□ 0.93
HIPK4Q8NE63 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIPK4Q8NE63 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HIPK4Q8NE63 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIPK4Q8NE63 AC244015.2-201ENST00000616358 1861 ntBASIC20.83■□□□□ 0.92
HIPK4Q8NE63 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIPK4Q8NE63 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.83■□□□□ 0.92
HIPK4Q8NE63 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIPK4Q8NE63 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.83■□□□□ 0.92
HIPK4Q8NE63 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIPK4Q8NE63 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 AC103834.1-201ENST00000520383 144 ntBASIC20.81■□□□□ 0.92
HIPK4Q8NE63 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.81■□□□□ 0.92
HIPK4Q8NE63 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms