Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHDHQ8NE62 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHDHQ8NE62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.39■□□□□ 0.86
CHDHQ8NE62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHDHQ8NE62 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.39■□□□□ 0.86
CHDHQ8NE62 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
CHDHQ8NE62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.39■□□□□ 0.85
CHDHQ8NE62 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.39■□□□□ 0.85
CHDHQ8NE62 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.39■□□□□ 0.85
CHDHQ8NE62 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHDHQ8NE62 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CHDHQ8NE62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 AC006455.2-201ENST00000429931 906 ntBASIC20.38■□□□□ 0.85
CHDHQ8NE62 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 AC104564.3-201ENST00000582367 638 ntBASIC20.38■□□□□ 0.85
CHDHQ8NE62 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 AC099791.2-201ENST00000605725 427 ntBASIC20.38■□□□□ 0.85
CHDHQ8NE62 LINC01960-201ENST00000563759 1884 ntBASIC20.38■□□□□ 0.85
CHDHQ8NE62 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHDHQ8NE62 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHDHQ8NE62 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CHDHQ8NE62 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHDHQ8NE62 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHDHQ8NE62 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHDHQ8NE62 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.37■□□□□ 0.85
CHDHQ8NE62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.37■□□□□ 0.85
CHDHQ8NE62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHDHQ8NE62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHDHQ8NE62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHDHQ8NE62 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHDHQ8NE62 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 SRD5A1P1-201ENST00000442297 786 ntBASIC20.36■□□□□ 0.85
CHDHQ8NE62 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHDHQ8NE62 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHDHQ8NE62 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CHDHQ8NE62 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 AC092171.4-201ENST00000609130 632 ntBASIC20.35■□□□□ 0.85
CHDHQ8NE62 pRNA.6-201ENST00000610482 90 ntBASIC20.35■□□□□ 0.85
CHDHQ8NE62 pRNA.5-201ENST00000612139 90 ntBASIC20.35■□□□□ 0.85
CHDHQ8NE62 pRNA.11-201ENST00000618423 90 ntBASIC20.35■□□□□ 0.85
CHDHQ8NE62 pRNA.13-201ENST00000619112 90 ntBASIC20.35■□□□□ 0.85
CHDHQ8NE62 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.35■□□□□ 0.85
CHDHQ8NE62 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHDHQ8NE62 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
CHDHQ8NE62 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 FAM99A-202ENST00000538190 1989 ntBASIC20.34■□□□□ 0.85
CHDHQ8NE62 AC133637.1-201ENST00000624115 1537 ntBASIC20.34■□□□□ 0.85
CHDHQ8NE62 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.34■□□□□ 0.85
CHDHQ8NE62 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CHDHQ8NE62 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHDHQ8NE62 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHDHQ8NE62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms