Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 AC137767.1-201ENST00000602918 1920 ntBASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 AC079140.4-201ENST00000507448 529 ntBASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC44A5Q8NCS7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC44A5Q8NCS7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
SLC44A5Q8NCS7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC44A5Q8NCS7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 AC009237.3-201ENST00000393279 1427 ntBASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC44A5Q8NCS7 AP004607.7-201ENST00000527152 1677 ntBASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 OR7E47P-201ENST00000546390 1422 ntBASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 AC006015.1-201ENST00000429970 570 ntBASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLC44A5Q8NCS7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 AC055733.4-201ENST00000638462 1354 ntBASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 AC137761.2-201ENST00000561729 223 ntBASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 AC145350.3-201ENST00000569033 163 ntBASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 C1orf229-201ENST00000623686 2258 ntBASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC44A5Q8NCS7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC44A5Q8NCS7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC44A5Q8NCS7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SLC44A5Q8NCS7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC44A5Q8NCS7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC44A5Q8NCS7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
SLC44A5Q8NCS7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.45■■□□□ 1.66
SLC44A5Q8NCS7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
SLC44A5Q8NCS7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms