Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.49■■□□□ 1.51
RETREG2Q8NC44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RETREG2Q8NC44 GUSBP5-202ENST00000510805 1989 ntBASIC24.49■■□□□ 1.51
RETREG2Q8NC44 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RETREG2Q8NC44 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 AC004687.1-201ENST00000579003 1625 ntBASIC24.48■■□□□ 1.51
RETREG2Q8NC44 EP400NL-214ENST00000641289 2402 ntBASIC24.48■■□□□ 1.51
RETREG2Q8NC44 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RETREG2Q8NC44 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RETREG2Q8NC44 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 ECEL1P1-201ENST00000373592 1742 ntBASIC24.46■■□□□ 1.51
RETREG2Q8NC44 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RETREG2Q8NC44 AC016769.1-201ENST00000409132 1010 ntBASIC24.45■■□□□ 1.5
RETREG2Q8NC44 HLA-L-209ENST00000420110 1011 ntBASIC24.45■■□□□ 1.5
RETREG2Q8NC44 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 AC080038.1-201ENST00000611274 1154 ntBASIC24.45■■□□□ 1.5
RETREG2Q8NC44 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RETREG2Q8NC44 ESRRAP2-201ENST00000418437 1549 ntBASIC24.45■■□□□ 1.5
RETREG2Q8NC44 LINC00526-201ENST00000581067 1875 ntBASIC24.45■■□□□ 1.5
RETREG2Q8NC44 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RETREG2Q8NC44 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RETREG2Q8NC44 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 AC137761.2-201ENST00000561729 223 ntBASIC24.42■■□□□ 1.5
RETREG2Q8NC44 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 AC145350.3-201ENST00000569033 163 ntBASIC24.42■■□□□ 1.5
RETREG2Q8NC44 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 AC068587.7-201ENST00000641602 218 ntBASIC24.42■■□□□ 1.5
RETREG2Q8NC44 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.42■■□□□ 1.5
RETREG2Q8NC44 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 AC127496.7-201ENST00000625110 1798 ntBASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms