Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
RDH13Q8NBN7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RDH13Q8NBN7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RDH13Q8NBN7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.64■■□□□ 1.38
RDH13Q8NBN7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RDH13Q8NBN7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RDH13Q8NBN7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RDH13Q8NBN7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.64■■□□□ 1.37
RDH13Q8NBN7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RDH13Q8NBN7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.64■■□□□ 1.37
RDH13Q8NBN7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 AC092053.2-201ENST00000640557 1818 ntBASIC23.63■■□□□ 1.37
RDH13Q8NBN7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.63■■□□□ 1.37
RDH13Q8NBN7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH13Q8NBN7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RDH13Q8NBN7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 OR7E47P-201ENST00000546390 1422 ntBASIC23.6■■□□□ 1.37
RDH13Q8NBN7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH13Q8NBN7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 AC105265.2-201ENST00000467189 838 ntBASIC23.59■■□□□ 1.37
RDH13Q8NBN7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 AC079834.2-201ENST00000609776 1949 ntBASIC23.59■■□□□ 1.37
RDH13Q8NBN7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH13Q8NBN7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RDH13Q8NBN7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RDH13Q8NBN7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.58■■□□□ 1.37
RDH13Q8NBN7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.58■■□□□ 1.37
RDH13Q8NBN7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms