Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 TSPY6P-201ENST00000448518 926 ntBASIC20.36■□□□□ 0.85
EXD3Q8N9H8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 AC093827.2-201ENST00000512654 315 ntBASIC20.36■□□□□ 0.85
EXD3Q8N9H8 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
EXD3Q8N9H8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 AC092068.2-201ENST00000590491 1708 ntBASIC20.35■□□□□ 0.85
EXD3Q8N9H8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXD3Q8N9H8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 FP325331.1-202ENST00000623531 1380 ntBASIC20.34■□□□□ 0.85
EXD3Q8N9H8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 BX005040.4-201ENST00000637145 1518 ntBASIC20.34■□□□□ 0.85
EXD3Q8N9H8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
EXD3Q8N9H8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 GUSBP6-202ENST00000438529 1198 ntBASIC20.33■□□□□ 0.85
EXD3Q8N9H8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
EXD3Q8N9H8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXD3Q8N9H8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EXD3Q8N9H8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
EXD3Q8N9H8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EXD3Q8N9H8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 FAM201B-201ENST00000458407 597 ntBASIC20.32■□□□□ 0.84
EXD3Q8N9H8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 AL138781.1-201ENST00000566567 1274 ntBASIC20.32■□□□□ 0.84
EXD3Q8N9H8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXD3Q8N9H8 DUSP8P3-201ENST00000399571 1760 ntBASIC20.31■□□□□ 0.84
EXD3Q8N9H8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.31■□□□□ 0.84
EXD3Q8N9H8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 MFSD11-216ENST00000590393 1141 ntBASIC20.31■□□□□ 0.84
EXD3Q8N9H8 AC008687.6-201ENST00000596318 630 ntBASIC20.31■□□□□ 0.84
EXD3Q8N9H8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXD3Q8N9H8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 SLC7A5P2-201ENST00000553010 536 ntBASIC20.3■□□□□ 0.84
EXD3Q8N9H8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXD3Q8N9H8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms