Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 AL139246.5-201ENST00000606645 996 ntBASIC21.07■□□□□ 0.96
CPSF7Q8N684 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPSF7Q8N684 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF7Q8N684 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 DUX4L4-201ENST00000566884 1269 ntBASIC21.06■□□□□ 0.96
CPSF7Q8N684 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CPSF7Q8N684 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF7Q8N684 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPSF7Q8N684 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.05■□□□□ 0.96
CPSF7Q8N684 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 MIR638-201ENST00000385237 100 ntBASIC21.05■□□□□ 0.96
CPSF7Q8N684 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF7Q8N684 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
CPSF7Q8N684 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPSF7Q8N684 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.04■□□□□ 0.96
CPSF7Q8N684 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.04■□□□□ 0.96
CPSF7Q8N684 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.04■□□□□ 0.96
CPSF7Q8N684 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF7Q8N684 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF7Q8N684 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF7Q8N684 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF7Q8N684 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF7Q8N684 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CPSF7Q8N684 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF7Q8N684 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF7Q8N684 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CPSF7Q8N684 AC096631.2-201ENST00000436136 790 ntBASIC21.02■□□□□ 0.96
CPSF7Q8N684 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.02■□□□□ 0.96
CPSF7Q8N684 AC110285.6-201ENST00000617652 491 ntBASIC21.02■□□□□ 0.96
CPSF7Q8N684 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF7Q8N684 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPSF7Q8N684 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF7Q8N684 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF7Q8N684 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CPSF7Q8N684 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CPSF7Q8N684 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CPSF7Q8N684 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CPSF7Q8N684 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms