Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H2BBQ8N257 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H2BBQ8N257 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.23■□□□□ 0.19
HIST3H2BBQ8N257 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST3H2BBQ8N257 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST3H2BBQ8N257 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST3H2BBQ8N257 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.21■□□□□ 0.18
HIST3H2BBQ8N257 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST3H2BBQ8N257 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HIST3H2BBQ8N257 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST3H2BBQ8N257 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST3H2BBQ8N257 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 AC006077.2-201ENST00000623591 457 ntBASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H2BBQ8N257 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HIST3H2BBQ8N257 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 NEFHP1-201ENST00000412845 2629 ntBASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 AP000974.1-201ENST00000623909 2387 ntBASIC16.18■□□□□ 0.18
HIST3H2BBQ8N257 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST3H2BBQ8N257 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST3H2BBQ8N257 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST3H2BBQ8N257 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST3H2BBQ8N257 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST3H2BBQ8N257 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms