Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC073111.5-205ENST00000641717 521 ntBASIC23.39■■□□□ 1.33
VPS52Q8N1B4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS52Q8N1B4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.37■■□□□ 1.33
VPS52Q8N1B4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 AC079834.2-201ENST00000609776 1949 ntBASIC23.37■■□□□ 1.33
VPS52Q8N1B4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS52Q8N1B4 KRT19P1-201ENST00000405746 1186 ntBASIC23.36■■□□□ 1.33
VPS52Q8N1B4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS52Q8N1B4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 BID-214ENST00000617586 542 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS52Q8N1B4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.34■■□□□ 1.33
VPS52Q8N1B4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
VPS52Q8N1B4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 OXCT2P1-201ENST00000447263 1535 ntBASIC23.33■■□□□ 1.33
VPS52Q8N1B4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 AC026185.1-201ENST00000445748 174 ntBASIC23.33■■□□□ 1.33
VPS52Q8N1B4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.33■■□□□ 1.33
VPS52Q8N1B4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS52Q8N1B4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms