Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 AC099791.2-201ENST00000605725 427 ntBASIC21.25■□□□□ 0.99
APLFQ8IW19 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
APLFQ8IW19 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
APLFQ8IW19 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
APLFQ8IW19 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.24■□□□□ 0.99
APLFQ8IW19 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.24■□□□□ 0.99
APLFQ8IW19 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.24■□□□□ 0.99
APLFQ8IW19 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APLFQ8IW19 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
APLFQ8IW19 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.24■□□□□ 0.99
APLFQ8IW19 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.23■□□□□ 0.99
APLFQ8IW19 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.23■□□□□ 0.99
APLFQ8IW19 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.23■□□□□ 0.99
APLFQ8IW19 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.23■□□□□ 0.99
APLFQ8IW19 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
APLFQ8IW19 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
APLFQ8IW19 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.22■□□□□ 0.99
APLFQ8IW19 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.22■□□□□ 0.99
APLFQ8IW19 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
APLFQ8IW19 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
APLFQ8IW19 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
APLFQ8IW19 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.22■□□□□ 0.99
APLFQ8IW19 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APLFQ8IW19 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 FBXW4P1-201ENST00000426721 2239 ntBASIC21.21■□□□□ 0.99
APLFQ8IW19 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
APLFQ8IW19 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.21■□□□□ 0.99
APLFQ8IW19 C11orf96-202ENST00000528572 1834 ntBASIC21.21■□□□□ 0.99
APLFQ8IW19 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
APLFQ8IW19 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
APLFQ8IW19 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.21■□□□□ 0.99
APLFQ8IW19 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.21■□□□□ 0.99
APLFQ8IW19 AC009102.2-201ENST00000606772 1639 ntBASIC21.21■□□□□ 0.99
APLFQ8IW19 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
APLFQ8IW19 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
APLFQ8IW19 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
APLFQ8IW19 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APLFQ8IW19 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APLFQ8IW19 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.2■□□□□ 0.98
APLFQ8IW19 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APLFQ8IW19 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.2■□□□□ 0.98
APLFQ8IW19 AC241377.3-202ENST00000626088 1088 ntBASIC21.2■□□□□ 0.98
APLFQ8IW19 AC241585.3-202ENST00000628937 1088 ntBASIC21.2■□□□□ 0.98
APLFQ8IW19 AC245100.8-202ENST00000629247 1058 ntBASIC21.2■□□□□ 0.98
APLFQ8IW19 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APLFQ8IW19 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.2■□□□□ 0.98
APLFQ8IW19 AF106564.1-201ENST00000607058 2553 ntBASIC21.2■□□□□ 0.98
APLFQ8IW19 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.2■□□□□ 0.98
APLFQ8IW19 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
APLFQ8IW19 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
APLFQ8IW19 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.19■□□□□ 0.98
APLFQ8IW19 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
APLFQ8IW19 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
APLFQ8IW19 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APLFQ8IW19 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
APLFQ8IW19 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
APLFQ8IW19 AL022069.1-201ENST00000568025 1636 ntBASIC21.18■□□□□ 0.98
APLFQ8IW19 AC026310.3-201ENST00000625186 2373 ntBASIC21.18■□□□□ 0.98
APLFQ8IW19 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
APLFQ8IW19 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms