Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF135Q8IUD6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF135Q8IUD6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RNF135Q8IUD6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF135Q8IUD6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 SLC29A4P1-201ENST00000398760 971 ntBASIC22.89■■□□□ 1.25
RNF135Q8IUD6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 AC087239.1-201ENST00000622671 572 ntBASIC22.89■■□□□ 1.25
RNF135Q8IUD6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF135Q8IUD6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 FP325331.1-202ENST00000623531 1380 ntBASIC22.88■■□□□ 1.25
RNF135Q8IUD6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF135Q8IUD6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 AC231657.2-201ENST00000624556 255 ntBASIC22.87■■□□□ 1.25
RNF135Q8IUD6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF135Q8IUD6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 AC005181.1-201ENST00000604782 1256 ntBASIC22.86■■□□□ 1.25
RNF135Q8IUD6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF135Q8IUD6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.85■■□□□ 1.25
RNF135Q8IUD6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF135Q8IUD6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF135Q8IUD6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 AC007322.1-201ENST00000426983 750 ntBASIC22.83■■□□□ 1.25
RNF135Q8IUD6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 AC133041.1-202ENST00000642053 222 ntBASIC22.83■■□□□ 1.25
RNF135Q8IUD6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF135Q8IUD6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RNF135Q8IUD6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
RNF135Q8IUD6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms