Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.97■□□□□ 0.79
VRK2Q86Y07 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VRK2Q86Y07 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.97■□□□□ 0.79
VRK2Q86Y07 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VRK2Q86Y07 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK2Q86Y07 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK2Q86Y07 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK2Q86Y07 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK2Q86Y07 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 AC068587.7-201ENST00000641602 218 ntBASIC19.96■□□□□ 0.79
VRK2Q86Y07 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK2Q86Y07 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
VRK2Q86Y07 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.95■□□□□ 0.79
VRK2Q86Y07 AL137060.1-201ENST00000618151 2648 ntBASIC19.95■□□□□ 0.78
VRK2Q86Y07 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK2Q86Y07 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VRK2Q86Y07 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK2Q86Y07 DUX4L19-201ENST00000557448 1267 ntBASIC19.95■□□□□ 0.78
VRK2Q86Y07 AL138724.1-201ENST00000606771 1088 ntBASIC19.95■□□□□ 0.78
VRK2Q86Y07 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK2Q86Y07 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK2Q86Y07 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VRK2Q86Y07 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VRK2Q86Y07 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VRK2Q86Y07 OR7E47P-201ENST00000546390 1422 ntBASIC19.93■□□□□ 0.78
VRK2Q86Y07 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
VRK2Q86Y07 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VRK2Q86Y07 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.92■□□□□ 0.78
VRK2Q86Y07 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK2Q86Y07 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK2Q86Y07 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK2Q86Y07 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VRK2Q86Y07 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VRK2Q86Y07 AL136116.3-201ENST00000402907 1138 ntBASIC19.92■□□□□ 0.78
VRK2Q86Y07 AC010141.3-201ENST00000456659 717 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms