Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.05■■□□□ 1.28
DDX53Q86TM3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX53Q86TM3 UBE2DNL-204ENST00000602536 740 ntBASIC23.05■■□□□ 1.28
DDX53Q86TM3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.05■■□□□ 1.28
DDX53Q86TM3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
DDX53Q86TM3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
DDX53Q86TM3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX53Q86TM3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX53Q86TM3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX53Q86TM3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 AP001160.3-201ENST00000601484 763 ntBASIC23.04■■□□□ 1.28
DDX53Q86TM3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX53Q86TM3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX53Q86TM3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX53Q86TM3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 AL121832.2-201ENST00000610979 668 ntBASIC23.03■■□□□ 1.28
DDX53Q86TM3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX53Q86TM3 AL050303.2-201ENST00000619798 666 ntBASIC23.03■■□□□ 1.28
DDX53Q86TM3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX53Q86TM3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 AC007322.1-201ENST00000426983 750 ntBASIC23.02■■□□□ 1.28
DDX53Q86TM3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX53Q86TM3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX53Q86TM3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
DDX53Q86TM3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.01■■□□□ 1.27
DDX53Q86TM3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX53Q86TM3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 AC083906.2-201ENST00000511578 360 ntBASIC23.01■■□□□ 1.27
DDX53Q86TM3 AC142086.2-201ENST00000569753 217 ntBASIC23.01■■□□□ 1.27
DDX53Q86TM3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX53Q86TM3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 MYCNOS-205ENST00000641950 531 ntBASIC23.01■■□□□ 1.27
DDX53Q86TM3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX53Q86TM3 LINC01960-201ENST00000563759 1884 ntBASIC23■■□□□ 1.27
DDX53Q86TM3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
DDX53Q86TM3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23■■□□□ 1.27
DDX53Q86TM3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23■■□□□ 1.27
DDX53Q86TM3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23■■□□□ 1.27
DDX53Q86TM3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
DDX53Q86TM3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23■■□□□ 1.27
DDX53Q86TM3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23■■□□□ 1.27
DDX53Q86TM3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX53Q86TM3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23■■□□□ 1.27
DDX53Q86TM3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX53Q86TM3 ABHD17AP1-201ENST00000358206 933 ntBASIC22.99■■□□□ 1.27
DDX53Q86TM3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX53Q86TM3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
DDX53Q86TM3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX53Q86TM3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX53Q86TM3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX53Q86TM3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX53Q86TM3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX53Q86TM3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX53Q86TM3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX53Q86TM3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX53Q86TM3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX53Q86TM3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
DDX53Q86TM3 TSPY6P-201ENST00000448518 926 ntBASIC22.98■■□□□ 1.27
DDX53Q86TM3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX53Q86TM3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.98■■□□□ 1.27
DDX53Q86TM3 AC005181.1-201ENST00000604782 1256 ntBASIC22.98■■□□□ 1.27
DDX53Q86TM3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX53Q86TM3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX53Q86TM3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX53Q86TM3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
DDX53Q86TM3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms