Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SCXQ7RTU7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 AC233723.2-201ENST00000623798 2106 ntBASIC14.14□□□□□ -0.15
SCXQ7RTU7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCXQ7RTU7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCXQ7RTU7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 C1orf229-201ENST00000623686 2258 ntBASIC14.13□□□□□ -0.15
SCXQ7RTU7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 IGHV3-19-201ENST00000521488 291 ntBASIC14.13□□□□□ -0.15
SCXQ7RTU7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCXQ7RTU7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCXQ7RTU7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SCXQ7RTU7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCXQ7RTU7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 YBX1P1-201ENST00000445822 960 ntBASIC14.11□□□□□ -0.15
SCXQ7RTU7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 AL499627.2-201ENST00000606283 725 ntBASIC14.11□□□□□ -0.15
SCXQ7RTU7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms