Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 AC244015.2-201ENST00000616358 1861 ntBASIC19.47■□□□□ 0.71
SHFQ7M4L6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.46■□□□□ 0.71
SHFQ7M4L6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHFQ7M4L6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.46■□□□□ 0.71
SHFQ7M4L6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SHFQ7M4L6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 AC009102.2-201ENST00000606772 1639 ntBASIC19.46■□□□□ 0.71
SHFQ7M4L6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.46■□□□□ 0.71
SHFQ7M4L6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHFQ7M4L6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 AC010997.5-201ENST00000609182 354 ntBASIC19.45■□□□□ 0.7
SHFQ7M4L6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 AC073130.3-201ENST00000624389 2278 ntBASIC19.45■□□□□ 0.7
SHFQ7M4L6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHFQ7M4L6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHFQ7M4L6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SHFQ7M4L6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.44■□□□□ 0.7
SHFQ7M4L6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SHFQ7M4L6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.44■□□□□ 0.7
SHFQ7M4L6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SHFQ7M4L6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHFQ7M4L6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 AC239859.2-201ENST00000444165 318 ntBASIC19.43■□□□□ 0.7
SHFQ7M4L6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHFQ7M4L6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHFQ7M4L6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SHFQ7M4L6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.42■□□□□ 0.7
SHFQ7M4L6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.42■□□□□ 0.7
SHFQ7M4L6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHFQ7M4L6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 Z98882.1-201ENST00000622160 2253 ntBASIC19.41■□□□□ 0.7
SHFQ7M4L6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
SHFQ7M4L6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
SHFQ7M4L6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms