Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 CA15P2-201ENST00000611168 834 ntBASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 AC019069.1-201ENST00000610008 1333 ntBASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDHR3Q6ZTQ4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 C17orf82-201ENST00000623772 1530 ntBASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 UNC93B3-201ENST00000308076 687 ntBASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDHR3Q6ZTQ4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDHR3Q6ZTQ4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDHR3Q6ZTQ4 AC244015.2-201ENST00000616358 1861 ntBASIC21.64■■□□□ 1.06
CDHR3Q6ZTQ4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDHR3Q6ZTQ4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDHR3Q6ZTQ4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.64■■□□□ 1.06
CDHR3Q6ZTQ4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDHR3Q6ZTQ4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDHR3Q6ZTQ4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDHR3Q6ZTQ4 AC099791.2-201ENST00000605725 427 ntBASIC21.64■■□□□ 1.05
CDHR3Q6ZTQ4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDHR3Q6ZTQ4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 PBX2P1-201ENST00000493219 1291 ntBASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 AL136162.1-201ENST00000607711 1078 ntBASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 AC106739.1-201ENST00000617035 715 ntBASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.63■■□□□ 1.05
CDHR3Q6ZTQ4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CDHR3Q6ZTQ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDHR3Q6ZTQ4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDHR3Q6ZTQ4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDHR3Q6ZTQ4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms