Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.81■■□□□ 1.08
PACS1Q6VY07 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PACS1Q6VY07 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PACS1Q6VY07 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PACS1Q6VY07 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PACS1Q6VY07 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PACS1Q6VY07 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PACS1Q6VY07 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PACS1Q6VY07 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 AC026310.3-201ENST00000625186 2373 ntBASIC21.79■■□□□ 1.08
PACS1Q6VY07 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 OR2I1P-207ENST00000453522 948 ntBASIC21.79■■□□□ 1.08
PACS1Q6VY07 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PACS1Q6VY07 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PACS1Q6VY07 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PACS1Q6VY07 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PACS1Q6VY07 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 UNC93B3-201ENST00000308076 687 ntBASIC21.77■■□□□ 1.08
PACS1Q6VY07 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PACS1Q6VY07 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
PACS1Q6VY07 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PACS1Q6VY07 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.76■■□□□ 1.07
PACS1Q6VY07 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS1Q6VY07 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS1Q6VY07 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PACS1Q6VY07 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.76■■□□□ 1.07
PACS1Q6VY07 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PACS1Q6VY07 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PACS1Q6VY07 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PACS1Q6VY07 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms