Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SMARCD3Q6STE5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD3Q6STE5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCD3Q6STE5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 AC026310.3-201ENST00000625186 2373 ntBASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD3Q6STE5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD3Q6STE5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD3Q6STE5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD3Q6STE5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms