Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 AC136469.2-201ENST00000623944 1028 ntBASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN4Q6PJG9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 OR2I1P-207ENST00000453522 948 ntBASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 AC010525.1-201ENST00000585559 441 ntBASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 CA15P2-201ENST00000611168 834 ntBASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 AL031602.1-201ENST00000633169 911 ntBASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRFN4Q6PJG9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 AC137767.1-201ENST00000602918 1920 ntBASIC19.35■□□□□ 0.69
LRFN4Q6PJG9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN4Q6PJG9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN4Q6PJG9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN4Q6PJG9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 AC092053.2-201ENST00000640557 1818 ntBASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 AC139530.1-201ENST00000575312 1977 ntBASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 AC024257.2-201ENST00000549699 147 ntBASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 AL136162.1-201ENST00000607711 1078 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms