Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.71■■□□□ 1.71
CTR9Q6PD62 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
CTR9Q6PD62 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CTR9Q6PD62 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CTR9Q6PD62 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.7■■□□□ 1.71
CTR9Q6PD62 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CTR9Q6PD62 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.7■■□□□ 1.7
CTR9Q6PD62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.7■■□□□ 1.7
CTR9Q6PD62 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.7■■□□□ 1.7
CTR9Q6PD62 KRT18P61-201ENST00000585825 1298 ntBASIC25.7■■□□□ 1.7
CTR9Q6PD62 NTF6G-201ENST00000591094 616 ntBASIC25.7■■□□□ 1.7
CTR9Q6PD62 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CTR9Q6PD62 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.7■■□□□ 1.7
CTR9Q6PD62 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CTR9Q6PD62 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.69■■□□□ 1.7
CTR9Q6PD62 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CTR9Q6PD62 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CTR9Q6PD62 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CTR9Q6PD62 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.68■■□□□ 1.7
CTR9Q6PD62 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CTR9Q6PD62 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CTR9Q6PD62 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTR9Q6PD62 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CTR9Q6PD62 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CTR9Q6PD62 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.67■■□□□ 1.7
CTR9Q6PD62 OR7E47P-201ENST00000546390 1422 ntBASIC25.67■■□□□ 1.7
CTR9Q6PD62 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.67■■□□□ 1.7
CTR9Q6PD62 AC005224.4-201ENST00000583262 1652 ntBASIC25.67■■□□□ 1.7
CTR9Q6PD62 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTR9Q6PD62 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CTR9Q6PD62 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 AC022517.1-201ENST00000592429 346 ntBASIC25.66■■□□□ 1.7
CTR9Q6PD62 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CTR9Q6PD62 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTR9Q6PD62 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTR9Q6PD62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.66■■□□□ 1.7
CTR9Q6PD62 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTR9Q6PD62 AC139530.1-201ENST00000575312 1977 ntBASIC25.65■■□□□ 1.7
CTR9Q6PD62 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.65■■□□□ 1.7
CTR9Q6PD62 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTR9Q6PD62 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CTR9Q6PD62 AC009237.3-201ENST00000393279 1427 ntBASIC25.64■■□□□ 1.7
CTR9Q6PD62 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CTR9Q6PD62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CTR9Q6PD62 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.64■■□□□ 1.7
CTR9Q6PD62 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CTR9Q6PD62 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms