Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 PBX2P1-201ENST00000493219 1291 ntBASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF9Q5VWM5 FAM99A-202ENST00000538190 1989 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 AC133561.4-201ENST00000566112 224 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 AC106739.1-201ENST00000617035 715 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 FBXW4P1-201ENST00000426721 2239 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 AC026471.6-201ENST00000622954 1905 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 CLDN5-201ENST00000403084 2357 ntBASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF9Q5VWM5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF9Q5VWM5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 AC233992.3-201ENST00000607491 485 ntBASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 AL031432.3-201ENST00000607698 485 ntBASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF9Q5VWM5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF9Q5VWM5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PRAMEF9Q5VWM5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF9Q5VWM5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.83■□□□□ 0.92
PRAMEF9Q5VWM5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PRAMEF9Q5VWM5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF9Q5VWM5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 AC087239.1-201ENST00000622671 572 ntBASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF9Q5VWM5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF9Q5VWM5 AP001330.3-201ENST00000520123 633 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms