Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL13A1Q5TAT6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL13A1Q5TAT6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL13A1Q5TAT6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 AC007322.4-201ENST00000509611 723 ntBASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 AL355075.4-201ENST00000554988 638 ntBASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 AC233263.1-201ENST00000578059 224 ntBASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 MIR4785-201ENST00000585005 73 ntBASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL13A1Q5TAT6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.87■■□□□ 1.57
COL13A1Q5TAT6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 KRT17P3-201ENST00000420566 1262 ntBASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 AL049637.2-201ENST00000641778 930 ntBASIC24.86■■□□□ 1.57
COL13A1Q5TAT6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.85■■□□□ 1.57
COL13A1Q5TAT6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 AL121906.2-201ENST00000621597 723 ntBASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
COL13A1Q5TAT6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL13A1Q5TAT6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL13A1Q5TAT6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL13A1Q5TAT6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.83■■□□□ 1.57
COL13A1Q5TAT6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL13A1Q5TAT6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.83■■□□□ 1.56
COL13A1Q5TAT6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 AC005224.4-201ENST00000583262 1652 ntBASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 KRT18P20-201ENST00000548986 1279 ntBASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 AL353708.3-201ENST00000610272 989 ntBASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 AC006557.6-201ENST00000623071 864 ntBASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL13A1Q5TAT6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms