Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 AC009102.2-201ENST00000606772 1639 ntBASIC21.3■■□□□ 1
SH2D4BQ5SQS7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4BQ5SQS7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 AC009299.2-201ENST00000482477 511 ntBASIC21.28■■□□□ 1
SH2D4BQ5SQS7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4BQ5SQS7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 AC092028.1-203ENST00000608262 953 ntBASIC21.27■■□□□ 1
SH2D4BQ5SQS7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D4BQ5SQS7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 AC092667.1-201ENST00000434301 2586 ntBASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 KRT125P-201ENST00000546827 989 ntBASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH2D4BQ5SQS7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 CA15P2-201ENST00000611168 834 ntBASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D4BQ5SQS7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 AC239859.2-201ENST00000444165 318 ntBASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SH2D4BQ5SQS7 MTDHP2-201ENST00000601468 714 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms