Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 MFSD11-216ENST00000590393 1141 ntBASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRTCAP3Q53RY4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 MIR663A-201ENST00000385250 93 ntBASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRTCAP3Q53RY4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 AP001160.3-201ENST00000601484 763 ntBASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 AC055733.4-201ENST00000638462 1354 ntBASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KRTCAP3Q53RY4 LINC01960-201ENST00000563759 1884 ntBASIC19.39■□□□□ 0.7
KRTCAP3Q53RY4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 AL355802.2-201ENST00000402069 882 ntBASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 AC007322.1-201ENST00000426983 750 ntBASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 AL034346.1-201ENST00000568244 1277 ntBASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRTCAP3Q53RY4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 KRT18P20-201ENST00000548986 1279 ntBASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 AL121832.2-201ENST00000610979 668 ntBASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.38■□□□□ 0.69
KRTCAP3Q53RY4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 DUX4L16-201ENST00000555130 1264 ntBASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.37■□□□□ 0.69
KRTCAP3Q53RY4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 UBE2DNL-204ENST00000602536 740 ntBASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 MYCNOS-205ENST00000641950 531 ntBASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 AP004607.7-201ENST00000527152 1677 ntBASIC19.36■□□□□ 0.69
KRTCAP3Q53RY4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 AC083906.2-201ENST00000511578 360 ntBASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms