Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 AC022517.1-201ENST00000592429 346 ntBASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRFAM7AQ494W8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRFAM7AQ494W8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CHRFAM7AQ494W8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CHRFAM7AQ494W8 AC007375.3-201ENST00000600936 2314 ntBASIC18.77■□□□□ 0.59
CHRFAM7AQ494W8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 IKBKGP1-201ENST00000612193 1073 ntBASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRFAM7AQ494W8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRFAM7AQ494W8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 AC092053.2-201ENST00000640557 1818 ntBASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 SLC47A1P1-202ENST00000449666 945 ntBASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRFAM7AQ494W8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 AL353803.4-201ENST00000565882 1934 ntBASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms