Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 GRX3YDR098C 858 nt5.26□□□□□ -1.57
UBP3Q01477 MST27YGL051W 705 nt5.26□□□□□ -1.57
UBP3Q01477 TAD1YGL243W 1203 nt5.26□□□□□ -1.57 RIP-Chip
UBP3Q01477 IKI1YHR187W 930 nt5.26□□□□□ -1.57
UBP3Q01477 YAL044W-AYAL044W-A 333 nt5.26□□□□□ -1.57
UBP3Q01477 MST28YAR033W 705 nt5.26□□□□□ -1.57
UBP3Q01477 CUE5YOR042W 1236 nt5.26□□□□□ -1.57
UBP3Q01477 CDC28YBR160W 897 nt5.26□□□□□ -1.57
UBP3Q01477 CTR86YCR054C 1692 nt5.26□□□□□ -1.57
UBP3Q01477 GLT1YDL171C 6438 nt5.26□□□□□ -1.57
UBP3Q01477 TGL4YKR089C 2733 nt5.25□□□□□ -1.57
UBP3Q01477 ROT2YBR229C 2865 nt5.25□□□□□ -1.57
UBP3Q01477 MIX14YDR031W 366 nt5.25□□□□□ -1.57
UBP3Q01477 RPC11YDR045C 333 nt5.25□□□□□ -1.57
UBP3Q01477 YOS1YER074W-A 258 nt5.25□□□□□ -1.57
UBP3Q01477 RPF1YHR088W 888 nt5.25□□□□□ -1.57
UBP3Q01477 YHR173CYHR173C 339 nt5.25□□□□□ -1.57
UBP3Q01477 REE1YJL217W 597 nt5.25□□□□□ -1.57
UBP3Q01477 YAL026C-AYAL026C-A 438 nt5.25□□□□□ -1.57
UBP3Q01477 YNL324WYNL324W 396 nt5.25□□□□□ -1.57
UBP3Q01477 ZPS1YOL154W 750 nt5.25□□□□□ -1.57
UBP3Q01477 RAD30YDR419W 1899 nt5.25□□□□□ -1.57 RIP-Chip
UBP3Q01477 TRM12YML005W 1389 nt5.25□□□□□ -1.57
UBP3Q01477 ACA1YER045C 1470 nt5.25□□□□□ -1.57
UBP3Q01477 UGA2YBR006W 1494 nt5.25□□□□□ -1.57
UBP3Q01477 MSC2YDR205W 2175 nt5.25□□□□□ -1.57 RIP-Chip
UBP3Q01477 YER187WYER187W 426 nt5.24□□□□□ -1.57 RIP-Chip
UBP3Q01477 CDC123YLR215C 1083 nt5.24□□□□□ -1.57
UBP3Q01477 YNL203CYNL203C 612 nt5.24□□□□□ -1.57
UBP3Q01477 COS1YNL336W 1146 nt5.24□□□□□ -1.57
UBP3Q01477 BUD6YLR319C 2367 nt5.24□□□□□ -1.57
UBP3Q01477 GLO3YER122C 1482 nt5.24□□□□□ -1.57 RIP-Chip
UBP3Q01477 SFI1YLL003W 2841 nt5.24□□□□□ -1.57
UBP3Q01477 SER33YIL074C 1410 nt5.23□□□□□ -1.57
UBP3Q01477 DTD1YDL219W 453 nt5.23□□□□□ -1.57
UBP3Q01477 PPH3YDR075W 927 nt5.23□□□□□ -1.57 RIP-Chip
UBP3Q01477 YDR157WYDR157W 402 nt5.23□□□□□ -1.57
UBP3Q01477 PGD1YGL025C 1194 nt5.23□□□□□ -1.57
UBP3Q01477 GTF1YGR102C 552 nt5.23□□□□□ -1.57
UBP3Q01477 GTR2YGR163W 1026 nt5.23□□□□□ -1.57
UBP3Q01477 YGR290WYGR290W 444 nt5.23□□□□□ -1.57
UBP3Q01477 YIR023C-AYIR023C-A 324 nt5.23□□□□□ -1.57
UBP3Q01477 MRP49YKL167C 414 nt5.23□□□□□ -1.57
UBP3Q01477 YAL056C-AYAL056C-A 351 nt5.23□□□□□ -1.57
UBP3Q01477 YLR217WYLR217W 324 nt5.23□□□□□ -1.57
UBP3Q01477 KRE29YER038C 1395 nt5.23□□□□□ -1.57
UBP3Q01477 SPO23YBR250W 1572 nt5.23□□□□□ -1.57
UBP3Q01477 CEX1YOR112W 2286 nt5.23□□□□□ -1.57 RIP-Chip
UBP3Q01477 YGR125WYGR125W 3111 nt5.23□□□□□ -1.57
UBP3Q01477 SED4YCR067C 3198 nt5.22□□□□□ -1.57
UBP3Q01477 APN2YBL019W 1563 nt5.22□□□□□ -1.57
UBP3Q01477 RAD18YCR066W 1464 nt5.22□□□□□ -1.57 RIP-Chip
UBP3Q01477 RPL28YGL103W 450 nt5.22□□□□□ -1.57 RIP-Chip
UBP3Q01477 YLR154W-FYLR154W-F 141 nt5.22□□□□□ -1.57
UBP3Q01477 IRC21YMR073C 606 nt5.22□□□□□ -1.57
UBP3Q01477 SOL1YNR034W 966 nt5.22□□□□□ -1.57
UBP3Q01477 YOL159C-AYOL159C-A 273 nt5.22□□□□□ -1.57
UBP3Q01477 YOR263CYOR263C 408 nt5.22□□□□□ -1.57
UBP3Q01477 QCR2YPR191W 1107 nt5.22□□□□□ -1.57
UBP3Q01477 YVC1YOR087W 2028 nt5.22□□□□□ -1.57
UBP3Q01477 HFA1YMR207C 6372 nt5.22□□□□□ -1.57
UBP3Q01477 MGS1YNL218W 1764 nt5.21□□□□□ -1.57
UBP3Q01477 NMD3YHR170W 1557 nt5.21□□□□□ -1.57 RIP-Chip
UBP3Q01477 ITT1YML068W 1395 nt5.21□□□□□ -1.58
UBP3Q01477 ERP3YDL018C 678 nt5.21□□□□□ -1.58
UBP3Q01477 SNU23YDL098C 585 nt5.21□□□□□ -1.58
UBP3Q01477 YDR417CYDR417C 372 nt5.21□□□□□ -1.58
UBP3Q01477 SNO3YFL060C 669 nt5.21□□□□□ -1.58
UBP3Q01477 YGL138CYGL138C 1038 nt5.21□□□□□ -1.58
UBP3Q01477 TRX2YGR209C 315 nt5.21□□□□□ -1.58 RIP-Chip
UBP3Q01477 SSO2YMR183C 888 nt5.21□□□□□ -1.58
UBP3Q01477 YNL046WYNL046W 519 nt5.21□□□□□ -1.58
UBP3Q01477 SNO2YNL334C 669 nt5.21□□□□□ -1.58
UBP3Q01477 YOR105WYOR105W 327 nt5.21□□□□□ -1.58
UBP3Q01477 DCS2YOR173W 1062 nt5.21□□□□□ -1.58
UBP3Q01477 RCN2YOR220W 798 nt5.21□□□□□ -1.58
UBP3Q01477 PRS5YOL061W 1491 nt5.2□□□□□ -1.58 RIP-Chip
UBP3Q01477 TAF10YDR167W 621 nt5.2□□□□□ -1.58 RIP-Chip
UBP3Q01477 PET130YJL023C 1044 nt5.2□□□□□ -1.58
UBP3Q01477 PEX15YOL044W 1152 nt5.2□□□□□ -1.58
UBP3Q01477 YOR366WYOR366W 354 nt5.2□□□□□ -1.58
UBP3Q01477 YCL002CYCL002C 792 nt5.2□□□□□ -1.58
UBP3Q01477 ABF1YKL112W 2196 nt5.2□□□□□ -1.58
UBP3Q01477 AVT2YEL064C 1443 nt5.2□□□□□ -1.58 RIP-Chip
UBP3Q01477 PHO5YBR093C 1404 nt5.2□□□□□ -1.58
UBP3Q01477 DHR2YKL078W 2208 nt5.2□□□□□ -1.58
UBP3Q01477 YAP1802YGR241C 1707 nt5.2□□□□□ -1.58
UBP3Q01477 CPS1YJL172W 1731 nt5.2□□□□□ -1.58
UBP3Q01477 SWP82YFL049W 1872 nt5.2□□□□□ -1.58
UBP3Q01477 RUD3YOR216C 1455 nt5.2□□□□□ -1.58
UBP3Q01477 SIP1YDR422C 2448 nt5.19□□□□□ -1.58
UBP3Q01477 PTR3YFR029W 2037 nt5.19□□□□□ -1.58
UBP3Q01477 tR(ACG)JtR(ACG)J 73 nt5.19□□□□□ -1.58
UBP3Q01477 CAP1YKL007W 807 nt5.19□□□□□ -1.58
UBP3Q01477 YLR257WYLR257W 966 nt5.19□□□□□ -1.58 RIP-Chip
UBP3Q01477 YMR010WYMR010W 1218 nt5.19□□□□□ -1.58
UBP3Q01477 FMP41YNL168C 780 nt5.19□□□□□ -1.58
UBP3Q01477 PSF3YOL146W 585 nt5.19□□□□□ -1.58
UBP3Q01477 MCA1YOR197W 1299 nt5.19□□□□□ -1.58
UBP3Q01477 PPT2YPL148C 522 nt5.19□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms