Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.7■□□□□ 0.26
SNRPEP62304 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNRPEP62304 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
SNRPEP62304 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNRPEP62304 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNRPEP62304 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.7■□□□□ 0.26
SNRPEP62304 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SNRPEP62304 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.7■□□□□ 0.26
SNRPEP62304 AC004408.2-201ENST00000623613 2777 ntBASIC16.7■□□□□ 0.26
SNRPEP62304 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.7■□□□□ 0.26
SNRPEP62304 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNRPEP62304 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SNRPEP62304 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SNRPEP62304 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.69■□□□□ 0.26
SNRPEP62304 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNRPEP62304 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRPEP62304 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPEP62304 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SNRPEP62304 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SNRPEP62304 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNRPEP62304 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPEP62304 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
SNRPEP62304 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPEP62304 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPEP62304 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPEP62304 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SNRPEP62304 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPEP62304 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNRPEP62304 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNRPEP62304 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPEP62304 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPEP62304 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 NEFHP1-201ENST00000412845 2629 ntBASIC16.66■□□□□ 0.26
SNRPEP62304 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNRPEP62304 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRPEP62304 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRPEP62304 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SNRPEP62304 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNRPEP62304 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRPEP62304 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
SNRPEP62304 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRPEP62304 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms