Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC004687.1-201ENST00000579003 1625 ntBASIC19.71■□□□□ 0.75
CDC42P60953 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDC42P60953 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42P60953 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42P60953 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.7■□□□□ 0.74
CDC42P60953 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42P60953 PVT1_1.1-201ENST00000615125 194 ntBASIC19.7■□□□□ 0.74
CDC42P60953 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42P60953 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42P60953 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDC42P60953 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDC42P60953 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDC42P60953 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42P60953 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.69■□□□□ 0.74
CDC42P60953 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CDC42P60953 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42P60953 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDC42P60953 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDC42P60953 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.69■□□□□ 0.74
CDC42P60953 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
CDC42P60953 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42P60953 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42P60953 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42P60953 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42P60953 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42P60953 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42P60953 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42P60953 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42P60953 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42P60953 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42P60953 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42P60953 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42P60953 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42P60953 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42P60953 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDC42P60953 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42P60953 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.66■□□□□ 0.74
CDC42P60953 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.66■□□□□ 0.74
CDC42P60953 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42P60953 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDC42P60953 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
CDC42P60953 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 NTF6A-201ENST00000591175 560 ntBASIC19.65■□□□□ 0.74
CDC42P60953 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 MIR6722-201ENST00000617286 78 ntBASIC19.65■□□□□ 0.74
CDC42P60953 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDC42P60953 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDC42P60953 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC42P60953 AF106564.1-201ENST00000607058 2553 ntBASIC19.65■□□□□ 0.74
CDC42P60953 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC42P60953 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms