Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SEC61BP60468 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 FXN-202ENST00000396364 980 ntTSL 5 BASIC11.62□□□□□ -0.55
SEC61BP60468 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC11.62□□□□□ -0.55
SEC61BP60468 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC11.62□□□□□ -0.55
SEC61BP60468 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC11.62□□□□□ -0.55
SEC61BP60468 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
SEC61BP60468 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.62□□□□□ -0.55
SEC61BP60468 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SEC61BP60468 AC005224.4-201ENST00000583262 1652 ntBASIC11.62□□□□□ -0.55
SEC61BP60468 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC11.61□□□□□ -0.55
SEC61BP60468 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC11.61□□□□□ -0.55
SEC61BP60468 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC11.61□□□□□ -0.55
SEC61BP60468 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.61□□□□□ -0.55
SEC61BP60468 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC11.61□□□□□ -0.55
SEC61BP60468 PPP1R14BP3-201ENST00000509033 445 ntBASIC11.61□□□□□ -0.55
SEC61BP60468 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 AL034346.1-201ENST00000568244 1277 ntBASIC11.61□□□□□ -0.55
SEC61BP60468 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SEC61BP60468 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SEC61BP60468 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SEC61BP60468 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.61□□□□□ -0.55
SEC61BP60468 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SEC61BP60468 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SEC61BP60468 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SEC61BP60468 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC11.6□□□□□ -0.55
SEC61BP60468 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC11.6□□□□□ -0.55
SEC61BP60468 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC11.6□□□□□ -0.55
SEC61BP60468 AL109923.1-201ENST00000618799 583 ntBASIC11.6□□□□□ -0.55
SEC61BP60468 AC231657.2-201ENST00000624556 255 ntBASIC11.6□□□□□ -0.55
SEC61BP60468 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SEC61BP60468 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SEC61BP60468 AC004812.2-201ENST00000611079 2094 ntBASIC11.59□□□□□ -0.55
SEC61BP60468 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
SEC61BP60468 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 GPX1P1-201ENST00000388829 606 ntBASIC11.59□□□□□ -0.55
SEC61BP60468 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC11.59□□□□□ -0.55
SEC61BP60468 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.59□□□□□ -0.55
SEC61BP60468 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC11.59□□□□□ -0.55
SEC61BP60468 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 RAP2CP1-201ENST00000605103 478 ntBASIC11.59□□□□□ -0.55
SEC61BP60468 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SEC61BP60468 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SEC61BP60468 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC11.58□□□□□ -0.56
SEC61BP60468 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms