Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.05■□□□□ 0.96
AP1S2P56377 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.05■□□□□ 0.96
AP1S2P56377 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.05■□□□□ 0.96
AP1S2P56377 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.05■□□□□ 0.96
AP1S2P56377 AC126544.1-201ENST00000580842 1059 ntBASIC21.05■□□□□ 0.96
AP1S2P56377 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.05■□□□□ 0.96
AP1S2P56377 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S2P56377 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
AP1S2P56377 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
AP1S2P56377 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
AP1S2P56377 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.04■□□□□ 0.96
AP1S2P56377 LINC00565-201ENST00000562710 2331 ntBASIC21.04■□□□□ 0.96
AP1S2P56377 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.04■□□□□ 0.96
AP1S2P56377 AC133561.4-201ENST00000566112 224 ntBASIC21.04■□□□□ 0.96
AP1S2P56377 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.04■□□□□ 0.96
AP1S2P56377 AL355001.2-201ENST00000620617 1191 ntBASIC21.04■□□□□ 0.96
AP1S2P56377 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.04■□□□□ 0.96
AP1S2P56377 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.04■□□□□ 0.96
AP1S2P56377 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S2P56377 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.03■□□□□ 0.96
AP1S2P56377 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.03■□□□□ 0.96
AP1S2P56377 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP1S2P56377 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.03■□□□□ 0.96
AP1S2P56377 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.03■□□□□ 0.96
AP1S2P56377 IGHV3-19-201ENST00000521488 291 ntBASIC21.03■□□□□ 0.96
AP1S2P56377 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.03■□□□□ 0.96
AP1S2P56377 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
AP1S2P56377 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
AP1S2P56377 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S2P56377 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
AP1S2P56377 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.02■□□□□ 0.96
AP1S2P56377 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 AP001330.3-201ENST00000520123 633 ntBASIC21.02■□□□□ 0.96
AP1S2P56377 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.02■□□□□ 0.96
AP1S2P56377 AL034346.1-201ENST00000568244 1277 ntBASIC21.02■□□□□ 0.96
AP1S2P56377 AC008764.7-201ENST00000593779 1081 ntBASIC21.02■□□□□ 0.96
AP1S2P56377 AL139246.5-201ENST00000606645 996 ntBASIC21.02■□□□□ 0.96
AP1S2P56377 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S2P56377 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
AP1S2P56377 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.01■□□□□ 0.95
AP1S2P56377 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 AC099791.1-201ENST00000416440 715 ntBASIC21.01■□□□□ 0.95
AP1S2P56377 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.01■□□□□ 0.95
AP1S2P56377 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.01■□□□□ 0.95
AP1S2P56377 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S2P56377 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21■□□□□ 0.95
AP1S2P56377 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
AP1S2P56377 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21■□□□□ 0.95
AP1S2P56377 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21■□□□□ 0.95
AP1S2P56377 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21■□□□□ 0.95
AP1S2P56377 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21■□□□□ 0.95
AP1S2P56377 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21■□□□□ 0.95
AP1S2P56377 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21■□□□□ 0.95
AP1S2P56377 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S2P56377 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 FAM99A-202ENST00000538190 1989 ntBASIC20.99■□□□□ 0.95
AP1S2P56377 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms