Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH11P55287 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH11P55287 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH11P55287 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
CDH11P55287 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDH11P55287 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH11P55287 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH11P55287 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.7■□□□□ 0.74
CDH11P55287 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH11P55287 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH11P55287 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH11P55287 FP325331.1-202ENST00000623531 1380 ntBASIC19.7■□□□□ 0.74
CDH11P55287 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDH11P55287 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH11P55287 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDH11P55287 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH11P55287 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH11P55287 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDH11P55287 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH11P55287 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH11P55287 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH11P55287 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH11P55287 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH11P55287 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 PBX2P1-201ENST00000493219 1291 ntBASIC19.68■□□□□ 0.74
CDH11P55287 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 AC005837.3-201ENST00000612163 286 ntBASIC19.68■□□□□ 0.74
CDH11P55287 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH11P55287 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH11P55287 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH11P55287 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDH11P55287 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH11P55287 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH11P55287 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDH11P55287 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH11P55287 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH11P55287 UNC93B3-201ENST00000308076 687 ntBASIC19.67■□□□□ 0.74
CDH11P55287 MIR935-201ENST00000401179 91 ntBASIC19.67■□□□□ 0.74
CDH11P55287 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH11P55287 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH11P55287 AC009086.3-201ENST00000623486 1008 ntBASIC19.67■□□□□ 0.74
CDH11P55287 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH11P55287 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH11P55287 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH11P55287 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.66■□□□□ 0.74
CDH11P55287 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDH11P55287 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH11P55287 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH11P55287 AC133561.4-201ENST00000566112 224 ntBASIC19.66■□□□□ 0.74
CDH11P55287 AL136162.1-201ENST00000607711 1078 ntBASIC19.66■□□□□ 0.74
CDH11P55287 AC106739.1-201ENST00000617035 715 ntBASIC19.66■□□□□ 0.74
CDH11P55287 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH11P55287 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH11P55287 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH11P55287 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDH11P55287 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH11P55287 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH11P55287 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH11P55287 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.65■□□□□ 0.74
CDH11P55287 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH11P55287 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms