Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.87■□□□□ 0.93
EPHA4P54764 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EPHA4P54764 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EPHA4P54764 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHA4P54764 AC016769.1-201ENST00000409132 1010 ntBASIC20.86■□□□□ 0.93
EPHA4P54764 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.86■□□□□ 0.93
EPHA4P54764 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA4P54764 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.86■□□□□ 0.93
EPHA4P54764 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA4P54764 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA4P54764 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA4P54764 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHA4P54764 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA4P54764 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
EPHA4P54764 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHA4P54764 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHA4P54764 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
EPHA4P54764 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHA4P54764 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.85■□□□□ 0.93
EPHA4P54764 AL034346.1-201ENST00000568244 1277 ntBASIC20.85■□□□□ 0.93
EPHA4P54764 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA4P54764 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA4P54764 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA4P54764 KRT87P-202ENST00000534226 1464 ntBASIC20.84■□□□□ 0.93
EPHA4P54764 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA4P54764 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
EPHA4P54764 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
EPHA4P54764 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
EPHA4P54764 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA4P54764 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA4P54764 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
EPHA4P54764 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA4P54764 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.83■□□□□ 0.93
EPHA4P54764 AC079834.2-201ENST00000609776 1949 ntBASIC20.83■□□□□ 0.93
EPHA4P54764 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA4P54764 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
EPHA4P54764 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.83■□□□□ 0.93
EPHA4P54764 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.83■□□□□ 0.93
EPHA4P54764 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.83■□□□□ 0.93
EPHA4P54764 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.83■□□□□ 0.93
EPHA4P54764 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA4P54764 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.83■□□□□ 0.92
EPHA4P54764 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA4P54764 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA4P54764 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
EPHA4P54764 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA4P54764 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA4P54764 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
EPHA4P54764 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
EPHA4P54764 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
EPHA4P54764 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA4P54764 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
EPHA4P54764 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
EPHA4P54764 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
EPHA4P54764 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA4P54764 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA4P54764 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EPHA4P54764 KRT18P11-201ENST00000435214 1283 ntBASIC20.82■□□□□ 0.92
EPHA4P54764 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.82■□□□□ 0.92
EPHA4P54764 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.82■□□□□ 0.92
EPHA4P54764 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.82■□□□□ 0.92
EPHA4P54764 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
EPHA4P54764 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA4P54764 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA4P54764 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
EPHA4P54764 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA4P54764 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA4P54764 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.81■□□□□ 0.92
EPHA4P54764 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.81■□□□□ 0.92
EPHA4P54764 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA4P54764 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA4P54764 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA4P54764 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA4P54764 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.8■□□□□ 0.92
EPHA4P54764 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.8■□□□□ 0.92
EPHA4P54764 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA4P54764 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA4P54764 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms