Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 AC004812.2-201ENST00000611079 2094 ntBASIC18.96■□□□□ 0.63
HCFC1P51610 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.96■□□□□ 0.63
HCFC1P51610 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.96■□□□□ 0.63
HCFC1P51610 CD99P1-205ENST00000527459 561 ntBASIC18.96■□□□□ 0.63
HCFC1P51610 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC1P51610 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HCFC1P51610 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1P51610 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1P51610 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.95■□□□□ 0.62
HCFC1P51610 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.95■□□□□ 0.62
HCFC1P51610 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HCFC1P51610 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1P51610 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 AC069152.1-201ENST00000438030 544 ntBASIC18.95■□□□□ 0.62
HCFC1P51610 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1P51610 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
HCFC1P51610 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1P51610 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC1P51610 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HCFC1P51610 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC1P51610 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.94■□□□□ 0.62
HCFC1P51610 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.94■□□□□ 0.62
HCFC1P51610 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HCFC1P51610 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.94■□□□□ 0.62
HCFC1P51610 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 TSPY20P-201ENST00000450910 630 ntBASIC18.93■□□□□ 0.62
HCFC1P51610 AL138781.1-201ENST00000566567 1274 ntBASIC18.93■□□□□ 0.62
HCFC1P51610 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.93■□□□□ 0.62
HCFC1P51610 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
HCFC1P51610 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC1P51610 TSPY6P-201ENST00000448518 926 ntBASIC18.93■□□□□ 0.62
HCFC1P51610 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.93■□□□□ 0.62
HCFC1P51610 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HCFC1P51610 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HCFC1P51610 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.92■□□□□ 0.62
HCFC1P51610 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 AC007322.1-201ENST00000426983 750 ntBASIC18.92■□□□□ 0.62
HCFC1P51610 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.92■□□□□ 0.62
HCFC1P51610 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HCFC1P51610 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.92■□□□□ 0.62
HCFC1P51610 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HCFC1P51610 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC1P51610 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HCFC1P51610 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 AC083906.2-201ENST00000511578 360 ntBASIC18.91■□□□□ 0.62
HCFC1P51610 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HCFC1P51610 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HCFC1P51610 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.91■□□□□ 0.62
HCFC1P51610 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.91■□□□□ 0.62
HCFC1P51610 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCFC1P51610 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.9■□□□□ 0.62
HCFC1P51610 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HCFC1P51610 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 KRT18P20-201ENST00000548986 1279 ntBASIC18.9■□□□□ 0.62
HCFC1P51610 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCFC1P51610 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.9■□□□□ 0.62
HCFC1P51610 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.89■□□□□ 0.61
HCFC1P51610 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 DUSP8P3-201ENST00000399571 1760 ntBASIC18.89■□□□□ 0.61
HCFC1P51610 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.89■□□□□ 0.61
HCFC1P51610 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms