Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.36■□□□□ 0.53
MECP2P51608 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.36■□□□□ 0.53
MECP2P51608 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MECP2P51608 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MECP2P51608 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
MECP2P51608 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MECP2P51608 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.35■□□□□ 0.53
MECP2P51608 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.35■□□□□ 0.53
MECP2P51608 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 TSPY13P-201ENST00000338964 914 ntBASIC18.35■□□□□ 0.53
MECP2P51608 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.35■□□□□ 0.53
MECP2P51608 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MECP2P51608 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
MECP2P51608 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.34■□□□□ 0.53
MECP2P51608 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MECP2P51608 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 AL033527.3-201ENST00000566366 1196 ntBASIC18.34■□□□□ 0.53
MECP2P51608 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.34■□□□□ 0.53
MECP2P51608 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MECP2P51608 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MECP2P51608 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MECP2P51608 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MECP2P51608 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MECP2P51608 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MECP2P51608 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MECP2P51608 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MECP2P51608 AF106564.1-201ENST00000607058 2553 ntBASIC18.33■□□□□ 0.52
MECP2P51608 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MECP2P51608 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MECP2P51608 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.33■□□□□ 0.52
MECP2P51608 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.33■□□□□ 0.52
MECP2P51608 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MECP2P51608 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MECP2P51608 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.33■□□□□ 0.52
MECP2P51608 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MECP2P51608 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MECP2P51608 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MECP2P51608 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MECP2P51608 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
MECP2P51608 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
MECP2P51608 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.32■□□□□ 0.52
MECP2P51608 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 AC144652.1-201ENST00000609974 1624 ntBASIC18.32■□□□□ 0.52
MECP2P51608 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
MECP2P51608 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.32■□□□□ 0.52
MECP2P51608 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
MECP2P51608 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
MECP2P51608 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MECP2P51608 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MECP2P51608 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MECP2P51608 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
MECP2P51608 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MECP2P51608 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MECP2P51608 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MECP2P51608 AC139795.1-202ENST00000500444 432 ntBASIC18.31■□□□□ 0.52
MECP2P51608 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.31■□□□□ 0.52
MECP2P51608 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MECP2P51608 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MECP2P51608 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MECP2P51608 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
MECP2P51608 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
MECP2P51608 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.3■□□□□ 0.52
MECP2P51608 LINC01006-201ENST00000333319 2292 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms