Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX2P50458 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX2P50458 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX2P50458 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX2P50458 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LHX2P50458 AP004607.7-201ENST00000527152 1677 ntBASIC19.36■□□□□ 0.69
LHX2P50458 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX2P50458 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LHX2P50458 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX2P50458 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX2P50458 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.36■□□□□ 0.69
LHX2P50458 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.36■□□□□ 0.69
LHX2P50458 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX2P50458 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX2P50458 AC139530.1-201ENST00000575312 1977 ntBASIC19.35■□□□□ 0.69
LHX2P50458 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.35■□□□□ 0.69
LHX2P50458 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LHX2P50458 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.35■□□□□ 0.69
LHX2P50458 KRT18P61-201ENST00000585825 1298 ntBASIC19.35■□□□□ 0.69
LHX2P50458 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LHX2P50458 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.35■□□□□ 0.69
LHX2P50458 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.35■□□□□ 0.69
LHX2P50458 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX2P50458 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX2P50458 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX2P50458 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX2P50458 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX2P50458 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.34■□□□□ 0.69
LHX2P50458 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.34■□□□□ 0.69
LHX2P50458 AC022517.1-201ENST00000592429 346 ntBASIC19.34■□□□□ 0.69
LHX2P50458 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX2P50458 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX2P50458 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX2P50458 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX2P50458 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LHX2P50458 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
LHX2P50458 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX2P50458 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.33■□□□□ 0.68
LHX2P50458 AC079140.4-201ENST00000507448 529 ntBASIC19.33■□□□□ 0.68
LHX2P50458 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX2P50458 AL034346.1-201ENST00000568244 1277 ntBASIC19.33■□□□□ 0.68
LHX2P50458 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX2P50458 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX2P50458 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX2P50458 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX2P50458 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX2P50458 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX2P50458 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX2P50458 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LHX2P50458 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LHX2P50458 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.32■□□□□ 0.68
LHX2P50458 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.32■□□□□ 0.68
LHX2P50458 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 AP004607.4-201ENST00000530158 1459 ntBASIC19.32■□□□□ 0.68
LHX2P50458 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LHX2P50458 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 AC004854.2-201ENST00000608450 1441 ntBASIC19.32■□□□□ 0.68
LHX2P50458 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LHX2P50458 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LHX2P50458 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX2P50458 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LHX2P50458 AC055733.4-201ENST00000638462 1354 ntBASIC19.32■□□□□ 0.68
LHX2P50458 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LHX2P50458 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.31■□□□□ 0.68
LHX2P50458 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX2P50458 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LHX2P50458 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms