Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.08■□□□□ 0.65
SRP9P49458 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.08■□□□□ 0.64
SRP9P49458 AC131281.2-201ENST00000520478 145 ntBASIC19.08■□□□□ 0.64
SRP9P49458 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
SRP9P49458 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.08■□□□□ 0.64
SRP9P49458 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP9P49458 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.07■□□□□ 0.64
SRP9P49458 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SRP9P49458 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP9P49458 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SRP9P49458 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SRP9P49458 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP9P49458 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP9P49458 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP9P49458 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.07■□□□□ 0.64
SRP9P49458 AL512631.2-201ENST00000604634 923 ntBASIC19.07■□□□□ 0.64
SRP9P49458 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SRP9P49458 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.06■□□□□ 0.64
SRP9P49458 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 C17orf82-201ENST00000623772 1530 ntBASIC19.06■□□□□ 0.64
SRP9P49458 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP9P49458 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP9P49458 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP9P49458 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP9P49458 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP9P49458 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.05■□□□□ 0.64
SRP9P49458 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP9P49458 AC092171.4-201ENST00000609130 632 ntBASIC19.05■□□□□ 0.64
SRP9P49458 AC241377.3-202ENST00000626088 1088 ntBASIC19.05■□□□□ 0.64
SRP9P49458 AC241585.3-202ENST00000628937 1088 ntBASIC19.05■□□□□ 0.64
SRP9P49458 AC245100.8-202ENST00000629247 1058 ntBASIC19.05■□□□□ 0.64
SRP9P49458 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.05■□□□□ 0.64
SRP9P49458 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.05■□□□□ 0.64
SRP9P49458 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.05■□□□□ 0.64
SRP9P49458 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SRP9P49458 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP9P49458 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SRP9P49458 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 AC092667.1-201ENST00000434301 2586 ntBASIC19.04■□□□□ 0.64
SRP9P49458 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SRP9P49458 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 AL136116.3-201ENST00000402907 1138 ntBASIC19.04■□□□□ 0.64
SRP9P49458 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.04■□□□□ 0.64
SRP9P49458 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SRP9P49458 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.04■□□□□ 0.64
SRP9P49458 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.04■□□□□ 0.64
SRP9P49458 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SRP9P49458 FP325331.1-202ENST00000623531 1380 ntBASIC19.04■□□□□ 0.64
SRP9P49458 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SRP9P49458 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP9P49458 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SRP9P49458 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SRP9P49458 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.03■□□□□ 0.64
SRP9P49458 MIR4466-201ENST00000606121 54 ntBASIC19.03■□□□□ 0.64
SRP9P49458 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 AC144652.1-201ENST00000609974 1624 ntBASIC19.03■□□□□ 0.64
SRP9P49458 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP9P49458 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.02■□□□□ 0.64
SRP9P49458 AC010542.4-201ENST00000563151 1910 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms