Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YOR338WYOR338W 1092 nt2.86□□□□□ -1.95
CUP9P41817 POC4YPL144W 447 nt2.86□□□□□ -1.95
CUP9P41817 YMR018WYMR018W 1545 nt2.86□□□□□ -1.95
CUP9P41817 APN2YBL019W 1563 nt2.86□□□□□ -1.95
CUP9P41817 YBR138CYBR138C 1575 nt2.86□□□□□ -1.95
CUP9P41817 VTC4YJL012C 2166 nt2.85□□□□□ -1.95
CUP9P41817 SIR1YKR101W 1965 nt2.85□□□□□ -1.95
CUP9P41817 BAR1YIL015W 1764 nt2.85□□□□□ -1.95
CUP9P41817 SPO14YKR031C 5052 nt2.85□□□□□ -1.95
CUP9P41817 STE14YDR410C 720 nt2.85□□□□□ -1.95
CUP9P41817 YER039C-AYER039C-A 219 nt2.85□□□□□ -1.95
CUP9P41817 COS8YHL048W 1146 nt2.85□□□□□ -1.95
CUP9P41817 YHI9YHR029C 885 nt2.85□□□□□ -1.95
CUP9P41817 YJR037WYJR037W 384 nt2.85□□□□□ -1.95
CUP9P41817 YKT6YKL196C 603 nt2.85□□□□□ -1.95
CUP9P41817 MTD1YKR080W 963 nt2.85□□□□□ -1.95
CUP9P41817 PSR1YLL010C 1284 nt2.85□□□□□ -1.95
CUP9P41817 RNH203YLR154C 333 nt2.85□□□□□ -1.95
CUP9P41817 PRX1YBL064C 786 nt2.85□□□□□ -1.95
CUP9P41817 SEC6YIL068C 2418 nt2.85□□□□□ -1.95
CUP9P41817 FUN12YAL035W 3009 nt2.85□□□□□ -1.95
CUP9P41817 RIF1YBR275C 5751 nt2.85□□□□□ -1.95
CUP9P41817 NPL4YBR170C 1743 nt2.85□□□□□ -1.95
CUP9P41817 ETP1YHL010C 1758 nt2.84□□□□□ -1.95
CUP9P41817 RRN7YJL025W 1545 nt2.84□□□□□ -1.95
CUP9P41817 BMS1YPL217C 3552 nt2.84□□□□□ -1.95
CUP9P41817 NSA2YER126C 786 nt2.84□□□□□ -1.95
CUP9P41817 SPO12YHR152W 522 nt2.84□□□□□ -1.95
CUP9P41817 RPS21AYKR057W 264 nt2.84□□□□□ -1.95
CUP9P41817 CDC73YLR418C 1182 nt2.84□□□□□ -1.95
CUP9P41817 YBL039W-BYBL039W-B 180 nt2.84□□□□□ -1.95
CUP9P41817 VPS21YOR089C 633 nt2.84□□□□□ -1.95
CUP9P41817 TPK2YPL203W 1143 nt2.84□□□□□ -1.95
CUP9P41817 MIT1YEL007W 2001 nt2.84□□□□□ -1.95
CUP9P41817 CIN8YEL061C 3003 nt2.84□□□□□ -1.96
CUP9P41817 YKL050CYKL050C 2769 nt2.83□□□□□ -1.96
CUP9P41817 CHA4YLR098C 1947 nt2.83□□□□□ -1.96
CUP9P41817 SPS2YDR522C 1509 nt2.83□□□□□ -1.96
CUP9P41817 RGC1YPR115W 3252 nt2.83□□□□□ -1.96
CUP9P41817 UBP5YER144C 2418 nt2.83□□□□□ -1.96
CUP9P41817 ORC4YPR162C 1590 nt2.83□□□□□ -1.96
CUP9P41817 MRH1YDR033W 963 nt2.83□□□□□ -1.96
CUP9P41817 PUG1YER185W 912 nt2.83□□□□□ -1.96
CUP9P41817 RPL15AYLR029C 615 nt2.83□□□□□ -1.96
CUP9P41817 RPS31YLR167W 459 nt2.83□□□□□ -1.96
CUP9P41817 YLR462WYLR462W 609 nt2.83□□□□□ -1.96
CUP9P41817 YNR071CYNR071C 1029 nt2.83□□□□□ -1.96
CUP9P41817 CDC40YDR364C 1368 nt2.83□□□□□ -1.96
CUP9P41817 SNT1YCR033W 3681 nt2.83□□□□□ -1.96
CUP9P41817 BMH2YDR099W 822 nt2.82□□□□□ -1.96
CUP9P41817 MRPL24YMR193W 777 nt2.82□□□□□ -1.96
CUP9P41817 TYR1YBR166C 1359 nt2.82□□□□□ -1.96
CUP9P41817 MEK1YOR351C 1494 nt2.82□□□□□ -1.96
CUP9P41817 FLO1YAR050W 4614 nt2.82□□□□□ -1.96
CUP9P41817 MNR2YKL064W 2910 nt2.82□□□□□ -1.96
CUP9P41817 YAL065CYAL065C 387 nt2.81□□□□□ -1.96
CUP9P41817 RPL8BYLL045C 771 nt2.81□□□□□ -1.96
CUP9P41817 PEX12YMR026C 1200 nt2.81□□□□□ -1.96
CUP9P41817 MET10YFR030W 3108 nt2.8□□□□□ -1.96
CUP9P41817 YDL176WYDL176W 2127 nt2.8□□□□□ -1.96
CUP9P41817 YCR101CYCR101C 549 nt2.8□□□□□ -1.96
CUP9P41817 QRI7YDL104C 1224 nt2.8□□□□□ -1.96
CUP9P41817 PPH3YDR075W 927 nt2.8□□□□□ -1.96
CUP9P41817 RPL30YGL030W 318 nt2.8□□□□□ -1.96
CUP9P41817 YGR018CYGR018C 330 nt2.8□□□□□ -1.96
CUP9P41817 YAL064W-BYAL064W-B 381 nt2.8□□□□□ -1.96
CUP9P41817 GCD7YLR291C 1146 nt2.8□□□□□ -1.96
CUP9P41817 CHO2YGR157W 2610 nt2.8□□□□□ -1.96
CUP9P41817 IMD4YML056C 1575 nt2.79□□□□□ -1.96
CUP9P41817 SMI1YGR229C 1518 nt2.79□□□□□ -1.96
CUP9P41817 MGT1YDL200C 567 nt2.79□□□□□ -1.96
CUP9P41817 ERV14YGL054C 417 nt2.79□□□□□ -1.96
CUP9P41817 YJR128WYJR128W 360 nt2.79□□□□□ -1.96
CUP9P41817 RUF5-1RUF5-1 710 nt2.79□□□□□ -1.96
CUP9P41817 RUF5-2RUF5-2 710 nt2.79□□□□□ -1.96
CUP9P41817 DIB1YPR082C 432 nt2.79□□□□□ -1.96
CUP9P41817 SPO1YNL012W 1896 nt2.79□□□□□ -1.96
CUP9P41817 NAT1YDL040C 2565 nt2.79□□□□□ -1.96
CUP9P41817 URC2YDR520C 2319 nt2.79□□□□□ -1.96
CUP9P41817 NUP85YJR042W 2235 nt2.78□□□□□ -1.96
CUP9P41817 ARP4YJL081C 1470 nt2.78□□□□□ -1.96
CUP9P41817 MUM3YOR298W 1440 nt2.78□□□□□ -1.96
CUP9P41817 EPL1YFL024C 2499 nt2.78□□□□□ -1.96
CUP9P41817 YTA7YGR270W 4140 nt2.78□□□□□ -1.96
CUP9P41817 DBP10YDL031W 2988 nt2.78□□□□□ -1.96
CUP9P41817 DCS1YLR270W 1053 nt2.78□□□□□ -1.96
CUP9P41817 CSM3YMR048W 954 nt2.78□□□□□ -1.96
CUP9P41817 RUF21RUF21 707 nt2.78□□□□□ -1.96
CUP9P41817 RPS12YOR369C 432 nt2.78□□□□□ -1.96
CUP9P41817 AIM14YGL160W 1713 nt2.78□□□□□ -1.96
CUP9P41817 YSP2YDR326C 4317 nt2.78□□□□□ -1.96
CUP9P41817 YAK1YJL141C 2424 nt2.78□□□□□ -1.97
CUP9P41817 SPO77YLR341W 1434 nt2.77□□□□□ -1.97
CUP9P41817 ENA2YDR039C 3276 nt2.77□□□□□ -1.97
CUP9P41817 ENA1YDR040C 3276 nt2.77□□□□□ -1.97
CUP9P41817 PFK26YIL107C 2484 nt2.77□□□□□ -1.97
CUP9P41817 SUP45YBR143C 1314 nt2.77□□□□□ -1.97
CUP9P41817 PFA5YDR459C 1125 nt2.77□□□□□ -1.97
CUP9P41817 SNL1YIL016W 480 nt2.77□□□□□ -1.97
CUP9P41817 YIR040CYIR040C 333 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms