Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.93□□□□□ -0.02
RPL13AP40429 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.93□□□□□ -0.02
RPL13AP40429 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RPL13AP40429 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RPL13AP40429 ESRRAP2-201ENST00000418437 1549 ntBASIC14.92□□□□□ -0.02
RPL13AP40429 MIR219A2-201ENST00000608502 1504 ntBASIC14.92□□□□□ -0.02
RPL13AP40429 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RPL13AP40429 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 C11orf96-202ENST00000528572 1834 ntBASIC14.92□□□□□ -0.02
RPL13AP40429 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.92□□□□□ -0.02
RPL13AP40429 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPL13AP40429 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RPL13AP40429 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 AL359258.2-201ENST00000564063 1566 ntBASIC14.92□□□□□ -0.02
RPL13AP40429 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RPL13AP40429 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPL13AP40429 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPL13AP40429 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.91□□□□□ -0.02
RPL13AP40429 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL13AP40429 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPL13AP40429 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL13AP40429 RNF126P1-201ENST00000567452 1320 ntBASIC14.91□□□□□ -0.02
RPL13AP40429 FBXW4P1-201ENST00000426721 2239 ntBASIC14.9□□□□□ -0.02
RPL13AP40429 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPL13AP40429 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.9□□□□□ -0.02
RPL13AP40429 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.9□□□□□ -0.02
RPL13AP40429 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RPL13AP40429 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.9□□□□□ -0.02
RPL13AP40429 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPL13AP40429 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPL13AP40429 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL13AP40429 AF106564.1-201ENST00000607058 2553 ntBASIC14.89□□□□□ -0.03
RPL13AP40429 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL13AP40429 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL13AP40429 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL13AP40429 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms