Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.31■□□□□ 0.68
SOX6P35712 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.31■□□□□ 0.68
SOX6P35712 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.31■□□□□ 0.68
SOX6P35712 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.31■□□□□ 0.68
SOX6P35712 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SOX6P35712 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SOX6P35712 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.3■□□□□ 0.68
SOX6P35712 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.3■□□□□ 0.68
SOX6P35712 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.3■□□□□ 0.68
SOX6P35712 ABHD17AP5-201ENST00000580133 923 ntBASIC19.3■□□□□ 0.68
SOX6P35712 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SOX6P35712 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.3■□□□□ 0.68
SOX6P35712 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SOX6P35712 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SOX6P35712 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
SOX6P35712 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SOX6P35712 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOX6P35712 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SOX6P35712 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SOX6P35712 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SOX6P35712 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOX6P35712 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.27■□□□□ 0.68
SOX6P35712 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SOX6P35712 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.27■□□□□ 0.68
SOX6P35712 AF106564.1-201ENST00000607058 2553 ntBASIC19.27■□□□□ 0.68
SOX6P35712 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.27■□□□□ 0.68
SOX6P35712 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 AC026202.3-201ENST00000600805 1127 ntBASIC19.27■□□□□ 0.68
SOX6P35712 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOX6P35712 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SOX6P35712 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.27■□□□□ 0.67
SOX6P35712 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.27■□□□□ 0.67
SOX6P35712 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SOX6P35712 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
SOX6P35712 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 RAP2CP1-202ENST00000605179 643 ntBASIC19.26■□□□□ 0.67
SOX6P35712 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SOX6P35712 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.26■□□□□ 0.67
SOX6P35712 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX6P35712 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.25■□□□□ 0.67
SOX6P35712 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SOX6P35712 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SOX6P35712 AC144652.1-201ENST00000609974 1624 ntBASIC19.25■□□□□ 0.67
SOX6P35712 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SOX6P35712 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX6P35712 LINC01006-201ENST00000333319 2292 ntBASIC19.25■□□□□ 0.67
SOX6P35712 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX6P35712 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SOX6P35712 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SOX6P35712 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SOX6P35712 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.25■□□□□ 0.67
SOX6P35712 AC133552.2-201ENST00000619106 1032 ntBASIC19.25■□□□□ 0.67
SOX6P35712 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms