Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 LINC00526-201ENST00000581067 1875 ntBASIC17.48■□□□□ 0.39
SAA4P35542 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.48■□□□□ 0.39
SAA4P35542 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
SAA4P35542 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.48■□□□□ 0.39
SAA4P35542 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.48■□□□□ 0.39
SAA4P35542 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SAA4P35542 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.48■□□□□ 0.39
SAA4P35542 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.48■□□□□ 0.39
SAA4P35542 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SAA4P35542 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAA4P35542 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.48■□□□□ 0.39
SAA4P35542 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SAA4P35542 C1orf229-201ENST00000623686 2258 ntBASIC17.47■□□□□ 0.39
SAA4P35542 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SAA4P35542 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SAA4P35542 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SAA4P35542 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.47■□□□□ 0.39
SAA4P35542 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 AC005224.4-201ENST00000583262 1652 ntBASIC17.47■□□□□ 0.39
SAA4P35542 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.47■□□□□ 0.39
SAA4P35542 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.47■□□□□ 0.39
SAA4P35542 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SAA4P35542 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
SAA4P35542 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SAA4P35542 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SAA4P35542 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAA4P35542 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAA4P35542 AP004607.7-201ENST00000527152 1677 ntBASIC17.46■□□□□ 0.39
SAA4P35542 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SAA4P35542 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.46■□□□□ 0.39
SAA4P35542 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.46■□□□□ 0.39
SAA4P35542 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.46■□□□□ 0.39
SAA4P35542 AC079140.4-201ENST00000507448 529 ntBASIC17.46■□□□□ 0.39
SAA4P35542 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.46■□□□□ 0.39
SAA4P35542 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAA4P35542 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.46■□□□□ 0.39
SAA4P35542 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAA4P35542 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SAA4P35542 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.46■□□□□ 0.39
SAA4P35542 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SAA4P35542 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.46■□□□□ 0.39
SAA4P35542 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.45■□□□□ 0.38
SAA4P35542 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.45■□□□□ 0.38
SAA4P35542 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SAA4P35542 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SAA4P35542 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SAA4P35542 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SAA4P35542 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SAA4P35542 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SAA4P35542 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SAA4P35542 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SAA4P35542 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.44■□□□□ 0.38
SAA4P35542 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.44■□□□□ 0.38
SAA4P35542 AL034346.1-201ENST00000568244 1277 ntBASIC17.44■□□□□ 0.38
SAA4P35542 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.44■□□□□ 0.38
SAA4P35542 AC022517.1-201ENST00000592429 346 ntBASIC17.44■□□□□ 0.38
SAA4P35542 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.44■□□□□ 0.38
SAA4P35542 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.44■□□□□ 0.38
SAA4P35542 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SAA4P35542 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
SAA4P35542 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SAA4P35542 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.43■□□□□ 0.38
SAA4P35542 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SAA4P35542 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SAA4P35542 AC139530.1-201ENST00000575312 1977 ntBASIC17.43■□□□□ 0.38
SAA4P35542 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms