Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A4P31645 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC6A4P31645 AC104564.3-201ENST00000582367 638 ntBASIC22.27■■□□□ 1.16
SLC6A4P31645 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SLC6A4P31645 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SLC6A4P31645 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A4P31645 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC6A4P31645 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SLC6A4P31645 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SLC6A4P31645 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC6A4P31645 KRT18P61-201ENST00000585825 1298 ntBASIC22.26■■□□□ 1.15
SLC6A4P31645 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC6A4P31645 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC6A4P31645 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SLC6A4P31645 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A4P31645 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
SLC6A4P31645 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC6A4P31645 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.25■■□□□ 1.15
SLC6A4P31645 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.25■■□□□ 1.15
SLC6A4P31645 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AC092666.2-201ENST00000613287 246 ntBASIC22.25■■□□□ 1.15
SLC6A4P31645 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SLC6A4P31645 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SLC6A4P31645 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC6A4P31645 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A4P31645 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SLC6A4P31645 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 AP004607.7-201ENST00000527152 1677 ntBASIC22.24■■□□□ 1.15
SLC6A4P31645 AC005224.4-201ENST00000583262 1652 ntBASIC22.24■■□□□ 1.15
SLC6A4P31645 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC6A4P31645 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC6A4P31645 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.24■■□□□ 1.15
SLC6A4P31645 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC6A4P31645 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.24■■□□□ 1.15
SLC6A4P31645 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 ESRRAP2-201ENST00000418437 1549 ntBASIC22.24■■□□□ 1.15
SLC6A4P31645 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC6A4P31645 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SLC6A4P31645 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A4P31645 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 AC080038.3-201ENST00000623346 1952 ntBASIC22.23■■□□□ 1.15
SLC6A4P31645 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 NTF6G-201ENST00000591094 616 ntBASIC22.23■■□□□ 1.15
SLC6A4P31645 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A4P31645 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A4P31645 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A4P31645 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A4P31645 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
SLC6A4P31645 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC6A4P31645 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SLC6A4P31645 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A4P31645 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SLC6A4P31645 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC6A4P31645 AC009237.3-201ENST00000393279 1427 ntBASIC22.22■■□□□ 1.15
SLC6A4P31645 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A4P31645 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC6A4P31645 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SLC6A4P31645 AC127496.7-201ENST00000625110 1798 ntBASIC22.21■■□□□ 1.15
SLC6A4P31645 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
SLC6A4P31645 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SLC6A4P31645 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms