Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPS4Y1P22090 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS4Y1P22090 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPS4Y1P22090 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RPS4Y1P22090 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y1P22090 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.86■□□□□ 0.77
RPS4Y1P22090 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPS4Y1P22090 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RPS4Y1P22090 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.86■□□□□ 0.77
RPS4Y1P22090 MIR4767-201ENST00000582827 78 ntBASIC19.86■□□□□ 0.77
RPS4Y1P22090 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y1P22090 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y1P22090 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RPS4Y1P22090 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y1P22090 UNC93B3-201ENST00000308076 687 ntBASIC19.85■□□□□ 0.77
RPS4Y1P22090 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPS4Y1P22090 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4Y1P22090 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y1P22090 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4Y1P22090 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y1P22090 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4Y1P22090 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y1P22090 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 BX842568.3-201ENST00000418104 571 ntBASIC19.84■□□□□ 0.77
RPS4Y1P22090 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y1P22090 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
RPS4Y1P22090 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y1P22090 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y1P22090 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y1P22090 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.83■□□□□ 0.77
RPS4Y1P22090 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.83■□□□□ 0.77
RPS4Y1P22090 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.83■□□□□ 0.77
RPS4Y1P22090 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y1P22090 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y1P22090 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RPS4Y1P22090 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y1P22090 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RPS4Y1P22090 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.83■□□□□ 0.76
RPS4Y1P22090 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y1P22090 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 AC244015.2-201ENST00000616358 1861 ntBASIC19.82■□□□□ 0.76
RPS4Y1P22090 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 AC024257.2-201ENST00000549699 147 ntBASIC19.82■□□□□ 0.76
RPS4Y1P22090 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 AL136162.1-201ENST00000607711 1078 ntBASIC19.82■□□□□ 0.76
RPS4Y1P22090 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y1P22090 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y1P22090 AC007375.3-201ENST00000600936 2314 ntBASIC19.81■□□□□ 0.76
RPS4Y1P22090 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RPS4Y1P22090 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 AC026471.6-201ENST00000622954 1905 ntBASIC19.81■□□□□ 0.76
RPS4Y1P22090 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RPS4Y1P22090 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
RPS4Y1P22090 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.81■□□□□ 0.76
RPS4Y1P22090 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.81■□□□□ 0.76
RPS4Y1P22090 AC133561.4-201ENST00000566112 224 ntBASIC19.81■□□□□ 0.76
RPS4Y1P22090 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y1P22090 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.8■□□□□ 0.76
RPS4Y1P22090 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPS4Y1P22090 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 AC135279.3-201ENST00000610945 1311 ntBASIC19.8■□□□□ 0.76
RPS4Y1P22090 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPS4Y1P22090 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms