Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA4P12838 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
DEFA4P12838 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA4P12838 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA4P12838 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.48■□□□□ 0.39
DEFA4P12838 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DEFA4P12838 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DEFA4P12838 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DEFA4P12838 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.47■□□□□ 0.39
DEFA4P12838 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEFA4P12838 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 AC138932.1-201ENST00000534164 6830 ntBASIC17.46■□□□□ 0.39
DEFA4P12838 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
DEFA4P12838 AIRN-201ENST00000601203 4374 ntBASIC17.46■□□□□ 0.39
DEFA4P12838 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
DEFA4P12838 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
DEFA4P12838 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.46■□□□□ 0.39
DEFA4P12838 AL117332.1-201ENST00000622628 974 ntBASIC17.46■□□□□ 0.39
DEFA4P12838 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DEFA4P12838 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEFA4P12838 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.46■□□□□ 0.39
DEFA4P12838 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
DEFA4P12838 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.45■□□□□ 0.38
DEFA4P12838 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.45■□□□□ 0.38
DEFA4P12838 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.45■□□□□ 0.38
DEFA4P12838 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.45■□□□□ 0.38
DEFA4P12838 DUX4L4-201ENST00000566884 1269 ntBASIC17.45■□□□□ 0.38
DEFA4P12838 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.45■□□□□ 0.38
DEFA4P12838 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 AC026310.3-201ENST00000625186 2373 ntBASIC17.45■□□□□ 0.38
DEFA4P12838 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.45■□□□□ 0.38
DEFA4P12838 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEFA4P12838 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.44■□□□□ 0.38
DEFA4P12838 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
DEFA4P12838 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.44■□□□□ 0.38
DEFA4P12838 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.44■□□□□ 0.38
DEFA4P12838 AL356740.2-201ENST00000601559 647 ntBASIC17.44■□□□□ 0.38
DEFA4P12838 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.44■□□□□ 0.38
DEFA4P12838 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.44■□□□□ 0.38
DEFA4P12838 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DEFA4P12838 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.44■□□□□ 0.38
DEFA4P12838 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.44■□□□□ 0.38
DEFA4P12838 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.44■□□□□ 0.38
DEFA4P12838 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DEFA4P12838 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DEFA4P12838 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DEFA4P12838 C17orf82-201ENST00000623772 1530 ntBASIC17.43■□□□□ 0.38
DEFA4P12838 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 GUSBP5-201ENST00000418136 578 ntBASIC17.43■□□□□ 0.38
DEFA4P12838 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.43■□□□□ 0.38
DEFA4P12838 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.43■□□□□ 0.38
DEFA4P12838 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms