Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH1P12830 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH1P12830 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDH1P12830 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH1P12830 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDH1P12830 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH1P12830 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH1P12830 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDH1P12830 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH1P12830 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CDH1P12830 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH1P12830 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CDH1P12830 AC080038.3-201ENST00000623346 1952 ntBASIC21.03■□□□□ 0.96
CDH1P12830 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 EDA-201ENST00000338901 1233 ntBASIC21.03■□□□□ 0.96
CDH1P12830 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH1P12830 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH1P12830 AC233992.3-201ENST00000607491 485 ntBASIC21.03■□□□□ 0.96
CDH1P12830 CA15P2-201ENST00000611168 834 ntBASIC21.03■□□□□ 0.96
CDH1P12830 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH1P12830 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH1P12830 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH1P12830 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDH1P12830 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH1P12830 AP001330.3-201ENST00000520123 633 ntBASIC21.02■□□□□ 0.96
CDH1P12830 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH1P12830 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDH1P12830 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH1P12830 AC068587.7-201ENST00000641602 218 ntBASIC21.02■□□□□ 0.96
CDH1P12830 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH1P12830 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH1P12830 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH1P12830 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH1P12830 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDH1P12830 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CDH1P12830 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH1P12830 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH1P12830 AL355001.2-201ENST00000620617 1191 ntBASIC21.01■□□□□ 0.95
CDH1P12830 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH1P12830 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH1P12830 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH1P12830 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH1P12830 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH1P12830 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDH1P12830 AC139530.1-201ENST00000575312 1977 ntBASIC21■□□□□ 0.95
CDH1P12830 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDH1P12830 AC099791.1-201ENST00000416440 715 ntBASIC21■□□□□ 0.95
CDH1P12830 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21■□□□□ 0.95
CDH1P12830 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21■□□□□ 0.95
CDH1P12830 AF213884.3-201ENST00000563833 479 ntBASIC21■□□□□ 0.95
CDH1P12830 AL031432.3-201ENST00000607698 485 ntBASIC21■□□□□ 0.95
CDH1P12830 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21■□□□□ 0.95
CDH1P12830 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH1P12830 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDH1P12830 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH1P12830 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH1P12830 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH1P12830 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH1P12830 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH1P12830 AC092053.2-201ENST00000640557 1818 ntBASIC20.99■□□□□ 0.95
CDH1P12830 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH1P12830 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH1P12830 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 AP005435.1-201ENST00000529293 1178 ntBASIC20.99■□□□□ 0.95
CDH1P12830 AC027682.1-201ENST00000562846 899 ntBASIC20.99■□□□□ 0.95
CDH1P12830 AC133561.4-201ENST00000566112 224 ntBASIC20.99■□□□□ 0.95
CDH1P12830 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH1P12830 AC126544.1-201ENST00000580842 1059 ntBASIC20.99■□□□□ 0.95
CDH1P12830 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.99■□□□□ 0.95
CDH1P12830 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 AC087239.1-201ENST00000622671 572 ntBASIC20.99■□□□□ 0.95
CDH1P12830 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH1P12830 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CDH1P12830 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH1P12830 C11orf96-202ENST00000528572 1834 ntBASIC20.99■□□□□ 0.95
CDH1P12830 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDH1P12830 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH1P12830 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH1P12830 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDH1P12830 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH1P12830 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH1P12830 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH1P12830 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH1P12830 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH1P12830 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms