Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.59■■□□□ 1.05
THRAP10827 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.59■■□□□ 1.05
THRAP10827 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 AC092666.2-201ENST00000613287 246 ntBASIC21.59■■□□□ 1.05
THRAP10827 AC139530.1-201ENST00000575312 1977 ntBASIC21.59■■□□□ 1.05
THRAP10827 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.59■■□□□ 1.05
THRAP10827 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.58■■□□□ 1.05
THRAP10827 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.58■■□□□ 1.05
THRAP10827 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
THRAP10827 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
THRAP10827 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.58■■□□□ 1.05
THRAP10827 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
THRAP10827 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.58■■□□□ 1.05
THRAP10827 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
THRAP10827 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
THRAP10827 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
THRAP10827 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
THRAP10827 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
THRAP10827 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
THRAP10827 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
THRAP10827 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
THRAP10827 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
THRAP10827 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.57■■□□□ 1.04
THRAP10827 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.57■■□□□ 1.04
THRAP10827 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 AC104564.3-201ENST00000582367 638 ntBASIC21.57■■□□□ 1.04
THRAP10827 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 AC079630.1-202ENST00000618127 1840 ntBASIC21.57■■□□□ 1.04
THRAP10827 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
THRAP10827 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
THRAP10827 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
THRAP10827 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
THRAP10827 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.56■■□□□ 1.04
THRAP10827 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.56■■□□□ 1.04
THRAP10827 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.56■■□□□ 1.04
THRAP10827 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
THRAP10827 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
THRAP10827 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
THRAP10827 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.55■■□□□ 1.04
THRAP10827 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.55■■□□□ 1.04
THRAP10827 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.55■■□□□ 1.04
THRAP10827 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
THRAP10827 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THRAP10827 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THRAP10827 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.55■■□□□ 1.04
THRAP10827 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
THRAP10827 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THRAP10827 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.55■■□□□ 1.04
THRAP10827 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.54■■□□□ 1.04
THRAP10827 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
THRAP10827 AC087623.3-201ENST00000607047 1098 ntBASIC21.54■■□□□ 1.04
THRAP10827 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
THRAP10827 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
THRAP10827 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.53■■□□□ 1.04
THRAP10827 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
THRAP10827 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.53■■□□□ 1.04
THRAP10827 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.53■■□□□ 1.04
THRAP10827 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.53■■□□□ 1.04
THRAP10827 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.53■■□□□ 1.04
THRAP10827 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.53■■□□□ 1.04
THRAP10827 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.53■■□□□ 1.04
THRAP10827 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
THRAP10827 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THRAP10827 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.52■■□□□ 1.04
THRAP10827 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THRAP10827 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.52■■□□□ 1.04
THRAP10827 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THRAP10827 SLC47A1P1-202ENST00000449666 945 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms