Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GYPBP06028 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.38■□□□□ 0.69
GYPBP06028 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.37■□□□□ 0.69
GYPBP06028 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.37■□□□□ 0.69
GYPBP06028 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.37■□□□□ 0.69
GYPBP06028 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.37■□□□□ 0.69
GYPBP06028 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.37■□□□□ 0.69
GYPBP06028 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
GYPBP06028 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GYPBP06028 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.36■□□□□ 0.69
GYPBP06028 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GYPBP06028 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GYPBP06028 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.36■□□□□ 0.69
GYPBP06028 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.36■□□□□ 0.69
GYPBP06028 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GYPBP06028 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 AC006455.2-201ENST00000429931 906 ntBASIC19.36■□□□□ 0.69
GYPBP06028 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.36■□□□□ 0.69
GYPBP06028 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GYPBP06028 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 AL024507.2-201ENST00000606070 2574 ntBASIC19.35■□□□□ 0.69
GYPBP06028 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GYPBP06028 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
GYPBP06028 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.35■□□□□ 0.69
GYPBP06028 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.35■□□□□ 0.69
GYPBP06028 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GYPBP06028 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.35■□□□□ 0.69
GYPBP06028 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GYPBP06028 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.35■□□□□ 0.69
GYPBP06028 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.35■□□□□ 0.69
GYPBP06028 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
GYPBP06028 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GYPBP06028 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 KRT16P3-201ENST00000439127 1283 ntBASIC19.34■□□□□ 0.69
GYPBP06028 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.34■□□□□ 0.69
GYPBP06028 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.34■□□□□ 0.69
GYPBP06028 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 AC244015.2-201ENST00000616358 1861 ntBASIC19.34■□□□□ 0.69
GYPBP06028 AC133637.1-201ENST00000624115 1537 ntBASIC19.34■□□□□ 0.69
GYPBP06028 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GYPBP06028 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
GYPBP06028 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.34■□□□□ 0.69
GYPBP06028 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.34■□□□□ 0.69
GYPBP06028 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GYPBP06028 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GYPBP06028 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GYPBP06028 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GYPBP06028 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GYPBP06028 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GYPBP06028 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.33■□□□□ 0.69
GYPBP06028 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
GYPBP06028 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
GYPBP06028 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GYPBP06028 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.33■□□□□ 0.68
GYPBP06028 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.33■□□□□ 0.68
GYPBP06028 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GYPBP06028 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
GYPBP06028 pRNA.6-201ENST00000610482 90 ntBASIC19.33■□□□□ 0.68
GYPBP06028 pRNA.5-201ENST00000612139 90 ntBASIC19.33■□□□□ 0.68
GYPBP06028 pRNA.11-201ENST00000618423 90 ntBASIC19.33■□□□□ 0.68
GYPBP06028 pRNA.13-201ENST00000619112 90 ntBASIC19.33■□□□□ 0.68
GYPBP06028 AC241377.3-202ENST00000626088 1088 ntBASIC19.33■□□□□ 0.68
GYPBP06028 AC241585.3-202ENST00000628937 1088 ntBASIC19.33■□□□□ 0.68
GYPBP06028 AC245100.8-202ENST00000629247 1058 ntBASIC19.33■□□□□ 0.68
GYPBP06028 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.33■□□□□ 0.68
GYPBP06028 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GYPBP06028 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms