Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL5A2P05997 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.87■■■□□ 2.21
COL5A2P05997 RNA5SP413-201ENST00000516373 109 ntBASIC28.87■■■□□ 2.21
COL5A2P05997 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL5A2P05997 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.87■■■□□ 2.21
COL5A2P05997 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.87■■■□□ 2.21
COL5A2P05997 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL5A2P05997 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL5A2P05997 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
COL5A2P05997 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.86■■■□□ 2.21
COL5A2P05997 AC098590.1-201ENST00000468126 897 ntBASIC28.86■■■□□ 2.21
COL5A2P05997 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.86■■■□□ 2.21
COL5A2P05997 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL5A2P05997 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL5A2P05997 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL5A2P05997 AL139125.2-201ENST00000623134 1869 ntBASIC28.85■■■□□ 2.21
COL5A2P05997 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
COL5A2P05997 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.85■■■□□ 2.21
COL5A2P05997 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC28.85■■■□□ 2.21
COL5A2P05997 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.85■■■□□ 2.21
COL5A2P05997 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
COL5A2P05997 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL5A2P05997 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC28.85■■■□□ 2.21
COL5A2P05997 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.85■■■□□ 2.21
COL5A2P05997 MIR4758-201ENST00000577688 71 ntBASIC28.85■■■□□ 2.21
COL5A2P05997 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL5A2P05997 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL5A2P05997 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.84■■■□□ 2.21
COL5A2P05997 AC068338.2-201ENST00000563278 1430 ntBASIC28.84■■■□□ 2.21
COL5A2P05997 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL5A2P05997 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL5A2P05997 MIPEPP3-201ENST00000412105 444 ntBASIC28.84■■■□□ 2.21
COL5A2P05997 PPP1R14BP2-201ENST00000426284 444 ntBASIC28.84■■■□□ 2.21
COL5A2P05997 AC007322.4-201ENST00000509611 723 ntBASIC28.84■■■□□ 2.21
COL5A2P05997 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL5A2P05997 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
COL5A2P05997 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL5A2P05997 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
COL5A2P05997 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL5A2P05997 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL5A2P05997 RPS2P52-201ENST00000469610 820 ntBASIC28.83■■■□□ 2.21
COL5A2P05997 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.83■■■□□ 2.21
COL5A2P05997 SLC7A5P1-201ENST00000568957 537 ntBASIC28.83■■■□□ 2.21
COL5A2P05997 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.83■■■□□ 2.21
COL5A2P05997 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.83■■■□□ 2.21
COL5A2P05997 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.83■■■□□ 2.21
COL5A2P05997 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL5A2P05997 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL5A2P05997 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
COL5A2P05997 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
COL5A2P05997 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.82■■■□□ 2.2
COL5A2P05997 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
COL5A2P05997 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.81■■■□□ 2.2
COL5A2P05997 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL5A2P05997 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.81■■■□□ 2.2
COL5A2P05997 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
COL5A2P05997 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
COL5A2P05997 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
COL5A2P05997 KRT18P29-201ENST00000397031 1267 ntBASIC28.8■■■□□ 2.2
COL5A2P05997 RARRES2P4-201ENST00000514074 484 ntBASIC28.8■■■□□ 2.2
COL5A2P05997 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL5A2P05997 MKRN4P-201ENST00000444706 1521 ntBASIC28.8■■■□□ 2.2
COL5A2P05997 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
COL5A2P05997 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
COL5A2P05997 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
COL5A2P05997 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.79■■■□□ 2.2
COL5A2P05997 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.79■■■□□ 2.2
COL5A2P05997 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.79■■■□□ 2.2
COL5A2P05997 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
COL5A2P05997 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL5A2P05997 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL5A2P05997 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL5A2P05997 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL5A2P05997 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.79■■■□□ 2.2
COL5A2P05997 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.78■■■□□ 2.2
COL5A2P05997 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.78■■■□□ 2.2
COL5A2P05997 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
COL5A2P05997 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC28.78■■■□□ 2.2
COL5A2P05997 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.78■■■□□ 2.2
COL5A2P05997 AC083880.1-201ENST00000608266 535 ntBASIC28.78■■■□□ 2.2
COL5A2P05997 AC092118.2-201ENST00000613495 667 ntBASIC28.78■■■□□ 2.2
COL5A2P05997 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.78■■■□□ 2.2
COL5A2P05997 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.78■■■□□ 2.2
COL5A2P05997 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.78■■■□□ 2.2
COL5A2P05997 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
COL5A2P05997 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.78■■■□□ 2.2
COL5A2P05997 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.78■■■□□ 2.2
COL5A2P05997 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL5A2P05997 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.77■■■□□ 2.2
COL5A2P05997 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL5A2P05997 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL5A2P05997 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms