Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC007322.1-201ENST00000426983 750 ntBASIC17.81■□□□□ 0.44
TGFAP01135 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
TGFAP01135 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.81■□□□□ 0.44
TGFAP01135 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.81■□□□□ 0.44
TGFAP01135 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.81■□□□□ 0.44
TGFAP01135 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.81■□□□□ 0.44
TGFAP01135 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TGFAP01135 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.8■□□□□ 0.44
TGFAP01135 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 AC083906.2-201ENST00000511578 360 ntBASIC17.8■□□□□ 0.44
TGFAP01135 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.8■□□□□ 0.44
TGFAP01135 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.8■□□□□ 0.44
TGFAP01135 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TGFAP01135 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TGFAP01135 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.8■□□□□ 0.44
TGFAP01135 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.8■□□□□ 0.44
TGFAP01135 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TGFAP01135 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TGFAP01135 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TGFAP01135 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TGFAP01135 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TGFAP01135 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.79■□□□□ 0.44
TGFAP01135 CD99P1-205ENST00000527459 561 ntBASIC17.79■□□□□ 0.44
TGFAP01135 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.79■□□□□ 0.44
TGFAP01135 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TGFAP01135 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
TGFAP01135 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TGFAP01135 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.79■□□□□ 0.44
TGFAP01135 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TGFAP01135 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.78■□□□□ 0.44
TGFAP01135 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TGFAP01135 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TGFAP01135 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.78■□□□□ 0.44
TGFAP01135 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.78■□□□□ 0.44
TGFAP01135 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.78■□□□□ 0.44
TGFAP01135 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TGFAP01135 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TGFAP01135 UBE2DNL-204ENST00000602536 740 ntBASIC17.78■□□□□ 0.44
TGFAP01135 AC005181.1-201ENST00000604782 1256 ntBASIC17.78■□□□□ 0.44
TGFAP01135 TMEM191A-211ENST00000637163 1067 ntBASIC17.78■□□□□ 0.44
TGFAP01135 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TGFAP01135 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.78■□□□□ 0.44
TGFAP01135 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TGFAP01135 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TGFAP01135 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.77■□□□□ 0.44
TGFAP01135 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.77■□□□□ 0.44
TGFAP01135 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TGFAP01135 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TGFAP01135 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TGFAP01135 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TGFAP01135 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.77■□□□□ 0.44
TGFAP01135 DUX4L16-201ENST00000555130 1264 ntBASIC17.77■□□□□ 0.44
TGFAP01135 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.77■□□□□ 0.44
TGFAP01135 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.77■□□□□ 0.44
TGFAP01135 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.77■□□□□ 0.44
TGFAP01135 AP001160.3-201ENST00000601484 763 ntBASIC17.77■□□□□ 0.44
TGFAP01135 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TGFAP01135 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TGFAP01135 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TGFAP01135 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.76■□□□□ 0.43
TGFAP01135 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.76■□□□□ 0.43
TGFAP01135 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TGFAP01135 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.76■□□□□ 0.43
TGFAP01135 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TGFAP01135 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TGFAP01135 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms