Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CSPG5O95196 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.21■■□□□ 1.31
CSPG5O95196 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSPG5O95196 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSPG5O95196 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.21■■□□□ 1.31
CSPG5O95196 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSPG5O95196 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSPG5O95196 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CSPG5O95196 AC007322.1-201ENST00000426983 750 ntBASIC23.2■■□□□ 1.3
CSPG5O95196 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.2■■□□□ 1.3
CSPG5O95196 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.2■■□□□ 1.3
CSPG5O95196 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CSPG5O95196 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.2■■□□□ 1.3
CSPG5O95196 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSPG5O95196 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CSPG5O95196 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 KRT87P-202ENST00000534226 1464 ntBASIC23.19■■□□□ 1.3
CSPG5O95196 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.19■■□□□ 1.3
CSPG5O95196 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.19■■□□□ 1.3
CSPG5O95196 AC098934.4-201ENST00000564127 592 ntBASIC23.19■■□□□ 1.3
CSPG5O95196 AC142086.2-201ENST00000569753 217 ntBASIC23.19■■□□□ 1.3
CSPG5O95196 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSPG5O95196 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.19■■□□□ 1.3
CSPG5O95196 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CSPG5O95196 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.18■■□□□ 1.3
CSPG5O95196 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.18■■□□□ 1.3
CSPG5O95196 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 SLC29A4P1-201ENST00000398760 971 ntBASIC23.18■■□□□ 1.3
CSPG5O95196 GUSBP6-202ENST00000438529 1198 ntBASIC23.18■■□□□ 1.3
CSPG5O95196 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.18■■□□□ 1.3
CSPG5O95196 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.18■■□□□ 1.3
CSPG5O95196 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.18■■□□□ 1.3
CSPG5O95196 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.18■■□□□ 1.3
CSPG5O95196 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSPG5O95196 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.17■■□□□ 1.3
CSPG5O95196 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CSPG5O95196 AC005224.4-201ENST00000583262 1652 ntBASIC23.17■■□□□ 1.3
CSPG5O95196 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSPG5O95196 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.17■■□□□ 1.3
CSPG5O95196 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSPG5O95196 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.17■■□□□ 1.3
CSPG5O95196 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.17■■□□□ 1.3
CSPG5O95196 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.17■■□□□ 1.3
CSPG5O95196 DUX4L16-201ENST00000555130 1264 ntBASIC23.17■■□□□ 1.3
CSPG5O95196 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.17■■□□□ 1.3
CSPG5O95196 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CSPG5O95196 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.16■■□□□ 1.3
CSPG5O95196 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CSPG5O95196 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.16■■□□□ 1.3
CSPG5O95196 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CSPG5O95196 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.16■■□□□ 1.3
CSPG5O95196 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSPG5O95196 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.16■■□□□ 1.3
CSPG5O95196 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
CSPG5O95196 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CSPG5O95196 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.15■■□□□ 1.3
CSPG5O95196 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.15■■□□□ 1.3
CSPG5O95196 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.15■■□□□ 1.3
CSPG5O95196 SLC7A5P2-201ENST00000553010 536 ntBASIC23.15■■□□□ 1.3
CSPG5O95196 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.15■■□□□ 1.3
CSPG5O95196 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.15■■□□□ 1.3
CSPG5O95196 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.15■■□□□ 1.3
CSPG5O95196 AC231657.2-201ENST00000624556 255 ntBASIC23.15■■□□□ 1.3
CSPG5O95196 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.15■■□□□ 1.3
CSPG5O95196 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.15■■□□□ 1.3
CSPG5O95196 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSPG5O95196 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CSPG5O95196 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CSPG5O95196 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.14■■□□□ 1.29
CSPG5O95196 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.14■■□□□ 1.29
CSPG5O95196 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.14■■□□□ 1.29
CSPG5O95196 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.13■■□□□ 1.29
CSPG5O95196 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSPG5O95196 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CSPG5O95196 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CSPG5O95196 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSPG5O95196 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSPG5O95196 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms