Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC29.03■■■□□ 2.24
LTN1O94822 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.03■■■□□ 2.24
LTN1O94822 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC29.03■■■□□ 2.24
LTN1O94822 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
LTN1O94822 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
LTN1O94822 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
LTN1O94822 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
LTN1O94822 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
LTN1O94822 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
LTN1O94822 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
LTN1O94822 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.03■■■□□ 2.24
LTN1O94822 AL121832.2-201ENST00000610979 668 ntBASIC29.03■■■□□ 2.24
LTN1O94822 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 AP004607.7-201ENST00000527152 1677 ntBASIC29.02■■■□□ 2.24
LTN1O94822 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.02■■■□□ 2.24
LTN1O94822 AC138907.5-202ENST00000569484 235 ntBASIC29.02■■■□□ 2.24
LTN1O94822 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.02■■■□□ 2.24
LTN1O94822 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.24
LTN1O94822 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
LTN1O94822 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
LTN1O94822 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
LTN1O94822 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
LTN1O94822 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
LTN1O94822 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.01■■■□□ 2.23
LTN1O94822 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29■■■□□ 2.23
LTN1O94822 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC29■■■□□ 2.23
LTN1O94822 TSPY6P-201ENST00000448518 926 ntBASIC29■■■□□ 2.23
LTN1O94822 MIR4651-201ENST00000582622 73 ntBASIC29■■■□□ 2.23
LTN1O94822 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
LTN1O94822 MDK-213ENST00000617138 635 ntTSL 2 BASIC29■■■□□ 2.23
LTN1O94822 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC29■■■□□ 2.23
LTN1O94822 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
LTN1O94822 AP006587.3-201ENST00000525742 1516 ntBASIC28.99■■■□□ 2.23
LTN1O94822 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
LTN1O94822 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
LTN1O94822 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
LTN1O94822 CYP2T1P-201ENST00000432607 1285 ntBASIC28.99■■■□□ 2.23
LTN1O94822 AC079089.2-201ENST00000531211 1277 ntBASIC28.99■■■□□ 2.23
LTN1O94822 AL138781.1-201ENST00000566567 1274 ntBASIC28.99■■■□□ 2.23
LTN1O94822 AL034346.1-201ENST00000568244 1277 ntBASIC28.99■■■□□ 2.23
LTN1O94822 AC005181.1-201ENST00000604782 1256 ntBASIC28.99■■■□□ 2.23
LTN1O94822 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
LTN1O94822 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.98■■■□□ 2.23
LTN1O94822 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.98■■■□□ 2.23
LTN1O94822 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LTN1O94822 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LTN1O94822 AC007322.1-201ENST00000426983 750 ntBASIC28.97■■■□□ 2.23
LTN1O94822 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.97■■■□□ 2.23
LTN1O94822 KRT18P20-201ENST00000548986 1279 ntBASIC28.97■■■□□ 2.23
LTN1O94822 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.97■■■□□ 2.23
LTN1O94822 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LTN1O94822 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
LTN1O94822 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
LTN1O94822 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LTN1O94822 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.96■■■□□ 2.23
LTN1O94822 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
LTN1O94822 KRT18P6-201ENST00000555540 1265 ntBASIC28.96■■■□□ 2.23
LTN1O94822 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
LTN1O94822 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.96■■■□□ 2.23
LTN1O94822 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.96■■■□□ 2.23
LTN1O94822 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
LTN1O94822 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.96■■■□□ 2.23
LTN1O94822 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
LTN1O94822 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.96■■■□□ 2.23
LTN1O94822 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
LTN1O94822 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
LTN1O94822 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
LTN1O94822 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
LTN1O94822 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.95■■■□□ 2.22
LTN1O94822 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
LTN1O94822 SLC29A4P1-201ENST00000398760 971 ntBASIC28.95■■■□□ 2.22
LTN1O94822 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
LTN1O94822 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
LTN1O94822 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.95■■■□□ 2.22
LTN1O94822 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.95■■■□□ 2.22
LTN1O94822 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.95■■■□□ 2.22
LTN1O94822 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms